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HES4

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HES4
Identifiers
AliasesHES4, bHLHb42, hes family bHLH transcription factor 4
External IDsOMIM:608060;GeneCards:HES4;OMA:HES4 - orthologs
Gene location (Human)
Chromosome 1 (human)
Chr.Chromosome 1 (human)[1]
Chromosome 1 (human)
Genomic location for HES4
Genomic location for HES4
Band1p36.33Start998,962bp[1]
End1,000,172bp[1]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • ventricular zone

  • popliteal artery

  • tibial arteries

  • olfactory zone of nasal mucosa

  • apex of heart

  • coronary artery

  • left coronary artery

  • right coronary artery

  • putamen

  • ganglionic eminence
    n/a
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

57801

n/a

Ensembl

ENSG00000188290

n/a

UniProt

Q9HCC6

n/a

RefSeq (mRNA)

NM_001142467
NM_021170

n/a

RefSeq (protein)

NP_001135939
NP_066993

n/a

Location (UCSC)Chr 1: 1 – 1 Mbn/a
PubMed search[2]n/a
Wikidata
View/Edit Human

Hes Family BHLH Transcription Factor 4 (HES4) is aprotein encoded by agene of the same name located onchromosome 1 in humans.[3] It does not currently have a known mouseortholog.

HES4 plays a major role in key developmental processes, particularly in theimmune system andbone formation. As a member of thebasic helix-loop-helix (bHLH) family oftranscription factors, HES4 plays a crucial role inT-cell development by responding toNotch1 signaling, which is vital for guidinghematopoietic progenitor cells toward becomingT-cells.[4]

Additionally, HES4 has emerged as a significant factor in the context ofosteosarcoma (OS), a type ofbone cancer, where its expression correlates with aggressivetumor behavior and poor patient prognosis.[5]

Structure

[edit]

Primary

[edit]

HES4 is apolypeptide chain consisting of 221amino acids with amolecular weight of 23,523 Da.[6]

Secondary

[edit]

The secondary structure of the completed HES4 protein features a structural motif known as thebasic helix-loop-helix (bHLH).[7] This motif is characterized by twoalpha helices connected by a loop, which allows for a compact and flexible structure.[8]

The bHLH domain plays a critical role inDNA binding andprotein-protein interactions, making it significant in various biological processes, particularly in the regulation ofgene expression.[8] In HES4, the basic region of the motif typically contains positively chargedamino acids that facilitate binding to specific DNA sequences, often in the context oftranscriptional regulation.

Function

[edit]

Notch1 activation

[edit]

HES4 plays an important role in the development ofT-cells, which are a type ofwhite blood cell that are a crucial part of the mammalianimmune system. The process ofT-cell development starts when a signaling pathway called Notch1 is activated in certain blood precursor cells, known ashematopoietic progenitor cells.

Notch1 activation is crucial for initiatingT-cell development while suppressingdifferentiation into other lineages. While the functions of these genes are well understood inmice, the absence of a mouseortholog for HES4 has made its role in humans less clear.

WhenNotch1 is activated, it acts like a switch that encourages these cells to become T-cells instead of other types of blood cells, such as those involved in the immune response orred blood cell formation. HES4 is one of the genes that responds to this activation, helping to guide the cells along the T-cell development path.

Research has shown that HES4 works alongside another gene calledHES1. While both genes help suppress the development of other cell types, they do so in different ways. HES1 primarily keeps the cells in a resting state, allowing them to maintain their potential to becomeT-cells. In contrast, HES4 also supports the early stages ofT-cell development but does not prevent the formation ofB-cells, another important type of immune cell.[4]

Together, HES4 andHES1 ensure that as blood precursor cells receive theNotch1 signal, so that they successfully start their journey to becoming T-cells.

Clinical significance

[edit]

BecauseT-cells play an important role in constantly scrutinizing and destroyingtumor cells,[9] and HES4 is important for the development ofT-cells in humans, it has been hypothesised to be anoncogene and has been investigated usinghuman cell lines andmice.

Bone cancer

[edit]

The clinical significance of HES4 inosteosarcoma (OS) is highlighted by its potential as aprognostic biomarker.

Studies using human OS cell lines bothin vitro and injecting them into live micein vivo have confirmed that overexpressing HES4 leads to larger and more aggressivetumors, with agreater tendency to spread to other parts of the body.[5]

Interestingly, while overexpressing HES4 promotes aggressive tumor behavior by inhibiting the normalbone cell differentiation process, anotherNotch1 target gene,HES1, has opposing effects, where overexpression has a preventative effect on tumor growth.[5]

References

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  1. ^abcGRCh38: Ensembl release 89: ENSG00000188290Ensembl, May 2017
  2. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  3. ^"Gene: HES4 (ENSG00000188290) - Summary - Homo_sapiens - Ensembl genome browser 113".asia.ensembl.org. Retrieved2024-10-24.
  4. ^abDe Decker M, Lavaert M, Roels J, Tilleman L, Vandekerckhove B, Leclercq G, et al. (January 2021)."HES1 and HES4 have non-redundant roles downstream of Notch during early human T-cell development".Haematologica.106 (1):130–141.doi:10.3324/haematol.2019.226126.PMC 7776241.PMID 31919081.
  5. ^abcMcManus M, Kleinerman E, Yang Y, Livingston JA, Mortus J, Rivera R, et al. (May 2017)."Hes4: A potential prognostic biomarker for newly diagnosed patients with high-grade osteosarcoma".Pediatric Blood & Cancer.64 (5).doi:10.1002/pbc.26318.PMC 6240354.PMID 27786411.
  6. ^"HES4_HUMAN".UniProt. Q9HCC6. Retrieved2024-10-24.
  7. ^"HES4 Gene - Hes Family BHLH Transcription Factor 4".GeneCards. Retrieved24 October 2024.
  8. ^abJones S (2004-05-28)."An overview of the basic helix-loop-helix proteins".Genome Biology.5 (6): 226.doi:10.1186/gb-2004-5-6-226.PMC 463060.PMID 15186484.
  9. ^Waldman AD, Fritz JM, Lenardo MJ (November 2020)."A guide to cancer immunotherapy: from T cell basic science to clinical practice".Nature Reviews. Immunology.20 (11):651–668.doi:10.1038/s41577-020-0306-5.PMC 7238960.PMID 32433532.
(1) Basic domains
(1.1) Basicleucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3)bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2)Zinc finger DNA-binding domains
(2.1)Nuclear receptor(Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3.1)Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3)Fork head /winged helix
(3.4)Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4)β-Scaffold factors with minor groove contacts
(4.1)Rel homology region
(4.2)STAT
(4.3) p53-like
(4.4)MADS box
(4.6)TATA-binding proteins
(4.7)High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3)Pocket domain
(0.5)AP-2/EREBP-related factors
(0.6) Miscellaneous
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