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GDF3

From Wikipedia, the free encyclopedia

Protein-coding gene in humans
GDF3
Identifiers
AliasesGDF3, KFS3, MCOP7, MCOPCB6, growth differentiation factor 3
External IDsOMIM:606522;MGI:95686;HomoloGene:7336;GeneCards:GDF3;OMA:GDF3 - orthologs
Gene location (Human)
Chromosome 12 (human)
Chr.Chromosome 12 (human)[1]
Chromosome 12 (human)
Genomic location for GDF3
Genomic location for GDF3
Band12p13.31Start7,689,784bp[1]
End7,695,775bp[1]
Gene location (Mouse)
Chromosome 6 (mouse)
Chr.Chromosome 6 (mouse)[2]
Chromosome 6 (mouse)
Genomic location for GDF3
Genomic location for GDF3
Band6 F1|6 57.7 cMStart122,582,362bp[2]
End122,587,046bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • gonad

  • testicle

  • spleen

  • muscle tissue

  • lymph node

  • smooth muscle tissue

  • right adrenal gland

  • adrenal cortex

  • left adrenal cortex

  • right adrenal cortex
Top expressed in
  • blastocyst

  • morula

  • embryo

  • gastrula

  • epiblast

  • embryo

  • submandibular gland

  • right ventricle

  • knee joint

  • bone marrow
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

9573

14562

Ensembl

ENSG00000184344

ENSMUSG00000030117

UniProt

Q9NR23

Q07104

RefSeq (mRNA)

NM_020634

NM_008108

RefSeq (protein)

NP_065685

NP_032134

Location (UCSC)Chr 12: 7.69 – 7.7 MbChr 6: 122.58 – 122.59 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Growth differentiation factor-3 (GDF3), also known asVg-related gene 2 (Vgr-2) isprotein that in humans is encoded by theGDF3gene.[5] GDF3 belongs to thetransforming growth factor beta (TGF-β) superfamily. It has high similarity to other TGF-β superfamily members including Vg1 (found in frogs) andGDF1.[5]

Tissue distribution

[edit]

Expression of GDF3 occurs inossifyingbone duringembryonic development and in thebrain,thymus,spleen,bone marrow andadipose tissue of adults.[6][7]

Function

[edit]

GDF3 is a bi-functional protein that has some intrinsic activity and also modulate other TGF-β superfamily members, e.g. potentiates the activity ofNODAL. It may also inhibit other TGF-β superfamily members (i.e.BMPs), thus regulating the balance between different modes of TGF-beta signaling.[8] It has been shown to negatively and positively controldifferentiation ofembryonic stem cells in mice and humans.[9] This molecule plays a role inmesoderm anddefinitive endoderm formation during the pre-gastrulation stages of development.[6]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000184344Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000030117Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^abCaricasole AA, van Schaik RH, Zeinstra LM, Wierikx CD, van Gurp RJ, van den Pol M, Looijenga LH, Oosterhuis JW, Pera MF, Ward A, de Bruijn D, Kramer P, de Jong FH, van den Eijnden-van Raaij AJ (January 1998)."Human growth-differentiation factor 3 (hGDF3): developmental regulation in human teratocarcinoma cell lines and expression in primary testicular germ cell tumours".Oncogene.16 (1):95–103.doi:10.1038/sj.onc.1201515.PMID 9467948.
  6. ^abChen C, Ware SM, Sato A, Houston-Hawkins DE, Habas R, Matzuk MM, Shen MM, Brown CW (January 2006). "The Vg1-related protein Gdf3 acts in a Nodal signaling pathway in the pre-gastrulation mouse embryo".Development.133 (2):319–29.doi:10.1242/dev.02210.PMID 16368929.S2CID 14505029.
  7. ^Hexige S, Guo J, Ma L, Sun Y, Liu X, Ma L, Yan X, Li Z, Yu L (December 2005). "Expression pattern of growth/differentiation factor 3 in human and murine cerebral cortex, hippocampus as well as cerebellum".Neurosci. Lett.389 (2):83–7.doi:10.1016/j.neulet.2005.06.071.PMID 16126341.S2CID 25293256.
  8. ^Levine A, Brivanlou A (2006)."GDF3 at the crossroads of TGF-beta signaling".Cell Cycle.5 (10):1069–73.doi:10.4161/cc.5.10.2771.PMID 16721050.
  9. ^Levine A, Brivanlou A (2006). "GDF3, a BMP inhibitor, regulates cell fate in stem cells and early embryos".Development.133 (2):209–16.doi:10.1242/dev.02192.PMID 16339188.S2CID 35923560.

Further reading

[edit]
TGF beta superfamily of ligands
Ligand ofACVR orTGFBR
Ligand ofBMPR
TGF beta receptors
(Activin,BMP,family)
TGFBR1:
TGFBR2:
TGFBR3:
Transducers/SMAD
Ligand inhibitors
Coreceptors
Other
Type I
ALK1 (ACVRL1)
ALK2 (ACVR1A)
ALK3 (BMPR1A)
ALK4 (ACVR1B)
ALK5 (TGFβR1)
ALK6 (BMPR1B)
ALK7 (ACVR1C)
Type II
TGFβR2
BMPR2
ACVR2A (ACVR2)
ACVR2B
AMHR2 (AMHR)
Type III
TGFβR3 (β-glycan)
Unsorted


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