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GABRA4

From Wikipedia, the free encyclopedia
Protein-coding gene in humans

GABRA4
Identifiers
AliasesGABRA4, gamma-aminobutyric acid type A receptor alpha4 subunit, gamma-aminobutyric acid type A receptor subunit alpha4
External IDsOMIM:137141;MGI:95616;HomoloGene:631;GeneCards:GABRA4;OMA:GABRA4 - orthologs
Gene location (Human)
Chromosome 4 (human)
Chr.Chromosome 4 (human)[1]
Chromosome 4 (human)
Genomic location for GABRA4
Genomic location for GABRA4
Band4p12Start46,918,900bp[1]
End46,993,581bp[1]
Gene location (Mouse)
Chromosome 5 (mouse)
Chr.Chromosome 5 (mouse)[2]
Chromosome 5 (mouse)
Genomic location for GABRA4
Genomic location for GABRA4
Band5|5 C3.1-C3.2Start71,569,749bp[2]
End71,658,308bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • postcentral gyrus

  • entorhinal cortex

  • buccal mucosa cell

  • superior frontal gyrus

  • middle temporal gyrus

  • Brodmann area 23

  • lateral nuclear group of thalamus

  • nucleus accumbens

  • endothelial cell

  • caudate nucleus
Top expressed in
  • lateral geniculate nucleus

  • medial dorsal nucleus

  • medial geniculate nucleus

  • olfactory tubercle

  • primary motor cortex

  • cingulate gyrus

  • piriform cortex

  • anterior amygdaloid area

  • nucleus accumbens

  • globus pallidus
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

2557

14397

Ensembl

ENSG00000109158

ENSMUSG00000029211

UniProt

P48169

Q9D6F4

RefSeq (mRNA)

NM_000809
NM_001204266
NM_001204267

NM_010251

RefSeq (protein)

NP_000800
NP_001191195
NP_001191196

NP_034381
NP_001345970
NP_001345972
NP_001345973
NP_001345974

NP_001345975
NP_001345976
NP_001345977
NP_001345979

Location (UCSC)Chr 4: 46.92 – 46.99 MbChr 5: 71.57 – 71.66 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Gamma-aminobutyric acid receptor subunit alpha-4 is aprotein that in humans is encoded by theGABRA4gene.[5][6]

GABA is the major inhibitory neurotransmitter in the mammalian brain where it acts at GABA-A receptors, which are ligand-gated chloride channels. Chloride conductance of these channels can be modulated by agents such as benzodiazepines that bind to the GABA-A receptor. At least 16 distinct subunits of GABA-A receptors have been identified.[6]

Research

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A study in mice compared wild-type animals with those lacking the Gabra4 gene. Gabra4 knockout mice exhibited behavioral alterations relative to wild-type controls, including enhanced performance in spatial learning tasks and reduced social interaction, features that have been described as relevant to autism spectrum disorder–associated phenotypes in animal models. Transcriptomic analysis of hippocampal tissue from knockout mice identified altered gene expression consistent with increased activity of N-methyl-D-aspartate (NMDA) receptor–related signaling pathways, which are involved in synaptic plasticity, learning, and neuronal excitability.[7]

See also

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References

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  1. ^abcGRCh38: Ensembl release 89: ENSG00000109158Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000029211Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^McLean PJ, Farb DH, Russek SJ (April 1995)."Mapping of the alpha 4 subunit gene (GABRA4) to human chromosome 4 defines an alpha 2-alpha 4-beta 1-gamma 1 gene cluster: further evidence that modern GABAA receptor gene clusters are derived from an ancestral cluster".Genomics.26 (3):580–586.doi:10.1016/0888-7543(95)80178-O.PMID 7607683.
  6. ^ab"Entrez Gene: GABRA4 gamma-aminobutyric acid (GABA) A receptor, alpha 4".
  7. ^Fan C, Gao Y, Liang G, Huang L, Wang J, Yang X, et al. (February 2020)."Transcriptomics of Gabra4 knockout mice reveals common NMDAR pathways underlying autism, memory, and epilepsy".Molecular Autism.11 (1) 13.doi:10.1186/s13229-020-0318-9.PMC 7007694.PMID 32033586.

Further reading

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External links

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This article incorporates text from theUnited States National Library of Medicine, which is in thepublic domain.

Cys-loop receptors
5-HT/serotonin
GABA
Glycine
Nicotinic acetylcholine
Zinc
Ionotropicglutamates
Ligand-gated only
Voltage- and ligand-gated
‘Orphan’
ATP-gated channels
Purinergic receptors
Ionotropic
GABAATooltip γ-Aminobutyric acid A receptor
GABAATooltip γ-Aminobutyric acid A-rho receptor
Metabotropic
GABABTooltip γ-Aminobutyric acid B receptor
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Thismembrane protein–related article is astub. You can help Wikipedia byadding missing information.

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