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FLNB

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens
FLNB
Available structures
PDBOrtholog search:PDBeRCSB
List of PDB id codes

2DI8,2DI9,2DIA,2DIB,2DIC,2DJ4,2DLG,2DMB,2DMC,2E9I,2E9J,2EE6,2EE9,2EEA,2EEB,2EEC,2EED,2WA5,2WA6,2WA7,3FER,4B7L

Identifiers
AliasesFLNB, ABP-278, ABP-280, AOI, FH1, FLN-B, FLN1L, LRS1, SCT, TABP, TAP, filamin B
External IDsOMIM:603381;MGI:2446089;HomoloGene:37480;GeneCards:FLNB;OMA:FLNB - orthologs
Gene location (Human)
Chromosome 3 (human)
Chr.Chromosome 3 (human)[1]
Chromosome 3 (human)
Genomic location for FLNB
Genomic location for FLNB
Band3p14.3Start58,008,398bp[1]
End58,172,251bp[1]
Gene location (Mouse)
Chromosome 14 (mouse)
Chr.Chromosome 14 (mouse)[2]
Chromosome 14 (mouse)
Genomic location for FLNB
Genomic location for FLNB
Band14|14 A1Start14,518,185bp[2]
End14,651,816bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • mucosa of transverse colon

  • tibial nerve

  • body of uterus

  • right uterine tube

  • sural nerve

  • prostate

  • muscle layer of sigmoid colon

  • mucosa of ileum

  • left lobe of thyroid gland

  • left uterine tube
Top expressed in
  • epithelium of stomach

  • phalanx of foot

  • left colon

  • mucous cell of stomach

  • pyloric antrum

  • secondary oocyte

  • corneal stroma

  • lip

  • submandibular gland

  • uterus
More reference expression data
BioGPS


More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

2317

286940

Ensembl

ENSG00000136068

ENSMUSG00000025278

UniProt

O75369

Q80X90

RefSeq (mRNA)

NM_001164317
NM_001164318
NM_001164319
NM_001457

NM_001081427
NM_134080

RefSeq (protein)

NP_001157789
NP_001157790
NP_001157791
NP_001448

NP_001074896
NP_598841

Location (UCSC)Chr 3: 58.01 – 58.17 MbChr 14: 14.52 – 14.65 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Filamin B, beta (FLNB), also known asFilamin B, beta (truncated actin binding protein 278 homolog), is acytoplasmicprotein which in humans is encoded by theFLNBgene.

FLNB regulates intracellular communication and signalling by cross-linking the proteinactin to allow direct communication between thecell membrane andcytoskeletal network, to control and guide proper skeletal development.[5]

Mutations in the FLNB gene are involved in severallethal bone dysplasias, includingboomerang dysplasia andatelosteogenesis type I.[6][7][8]

Interactions

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FLNB has been shown tointeract withGP1BA,[9]Filamin,[10]FBLIM1,[11]PSEN1,[12]CD29[13] andPSEN2.[12]

See also

[edit]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000136068Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000025278Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Lu J, Lian G, Lenkinski R, De Grand A, Vaid RR, Bryce T, Stasenko M, Boskey A, Walsh C, Sheen V (2007)."Filamin B mutations cause chondrocyte defects in skeletal development".Hum Mol Genet.16 (14):1661–1675.doi:10.1093/hmg/ddm114.PMID 17510210.
  6. ^Bicknell LS, Morgan T, Bonife L, Wessels MW, Bialer MG, Willems PJ, Cohen DH, Krakow D, Robertson SP (2005)."Mutations in FLNB cause boomerang dysplasia".Am J Med Genet.42 (7): e43.doi:10.1136/jmg.2004.029967.PMC 1736093.PMID 15994868.
  7. ^Greally MT; Jewett T; Smith WL Jr.; Penick GD; Williamson RA (1993). "Lethal bone dysplasia in a fetus with manifestations of Atelosteogenesis type I and Boomerang dysplasia".Am J Med Genet.47 (4):1086–1091.doi:10.1002/ajmg.1320470731.PMID 8291529.
  8. ^Nishimura G, Horiuchi T, Kim OH, Sasamoto Y (1997). "Atypical skeletal changes in otopalatodigital syndrome type II: phenotypic overlap among otopalatodigital syndrome type II, boomerang dysplasia, atelosteogenesis type I and type III, and lethal male phenotype of Melnick-Needles syndrome".Am J Med Genet.73 (2):132–138.doi:10.1002/(SICI)1096-8628(19971212)73:2<132::AID-AJMG6>3.0.CO;2-W.PMID 9409862.
  9. ^Takafuta, T; Wu G; Murphy G F; Shapiro S S (Jul 1998)."Human beta-filamin is a new protein that interacts with the cytoplasmic tail of glycoprotein Ibalpha".J. Biol. Chem.273 (28). UNITED STATES:17531–8.doi:10.1074/jbc.273.28.17531.ISSN 0021-9258.PMID 9651345.
  10. ^Sheen, Volney L; Feng Yuanyi; Graham Donna; Takafuta Toshiro; Shapiro Sandor S; Walsh Christopher A (Nov 2002)."Filamin A and Filamin B are co-expressed within neurons during periods of neuronal migration and can physically interact".Hum. Mol. Genet.11 (23). England:2845–54.doi:10.1093/hmg/11.23.2845.ISSN 0964-6906.PMID 12393796.
  11. ^Takafuta, Toshiro; Saeki Mari; Fujimoto Tetsuro-Takahiro; Fujimura Kingo; Shapiro Sandor S (Apr 2003)."A new member of the LIM protein family binds to filamin B and localizes at stress fibers".J. Biol. Chem.278 (14). United States:12175–81.doi:10.1074/jbc.M209339200.ISSN 0021-9258.PMID 12496242.
  12. ^abZhang, W; Han S W; McKeel D W; Goate A; Wu J Y (Feb 1998)."Interaction of presenilins with the filamin family of actin-binding proteins".J. Neurosci.18 (3). UNITED STATES:914–22.doi:10.1523/JNEUROSCI.18-03-00914.1998.ISSN 0270-6474.PMC 2042137.PMID 9437013.
  13. ^van der Flier, Arjan; Kuikman Ingrid; Kramer Duco; Geerts Dirk; Kreft Maaike; Takafuta Toshiro; Shapiro Sandor S; Sonnenberg Arnoud (Jan 2002)."Different splice variants of filamin-B affect myogenesis, subcellular distribution, and determine binding to integrin [beta] subunits".J. Cell Biol.156 (2). United States:361–76.doi:10.1083/jcb.200103037.ISSN 0021-9525.PMC 2199218.PMID 11807098.

External links

[edit]

Further reading

[edit]
PDB gallery
  • 2di8: Solution structure of the 19th filamin domain from human Filamin-B
    2di8: Solution structure of the 19th filamin domain from human Filamin-B
  • 2di9: Solution structure of the 9th filamin domain from human Filamin-B
    2di9: Solution structure of the 9th filamin domain from human Filamin-B
  • 2dia: Solution structure of the 10th filamin domain from human Filamin-B
    2dia: Solution structure of the 10th filamin domain from human Filamin-B
  • 2dib: Solution structure of the 11th filamin domain from human Filamin-B
    2dib: Solution structure of the 11th filamin domain from human Filamin-B
  • 2dic: Solution structure of the 12th filamin domain from human Filamin-B
    2dic: Solution structure of the 12th filamin domain from human Filamin-B
  • 2dj4: Solution structure of the 13th filamin domain from human Filamin-B
    2dj4: Solution structure of the 13th filamin domain from human Filamin-B
  • 2dlg: Solution structure of the 20th Filamin domain from human Filamin-B
    2dlg: Solution structure of the 20th Filamin domain from human Filamin-B
  • 2dmb: Solution structure of the 15th Filamin domain from human Filamin-B
    2dmb: Solution structure of the 15th Filamin domain from human Filamin-B
  • 2dmc: Solution structure of the 18th Filamin domain from human Filamin-B
    2dmc: Solution structure of the 18th Filamin domain from human Filamin-B
Human
Microfilaments
andABPs
Myofilament
Actins
Myosins
Other
Other
Intermediate
filaments
Type 1/2
(Keratin,
Cytokeratin)
Epithelial keratins
(soft alpha-keratins)
Hair keratins
(hard alpha-keratins)
Ungrouped alpha
Not alpha
Type 3
Type 4
Type 5
Microtubules
andMAPs
Tubulins
MAPs
Kinesins
Dyneins
Microtubule organising proteins
Microtubule severing proteins
Other
Catenins
Membrane
Other
Nonhuman
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