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FGR (gene)

From Wikipedia, the free encyclopedia
Protein-coding gene in humans

FGR
Identifiers
AliasesFGR, SRC2, c-fgr, c-src2, p55-Fgr, p55c-fgr, p58-Fgr, p58c-fgr, FGR proto-oncogene, Src family tyrosine kinase
External IDsOMIM:164940;MGI:95527;HomoloGene:3842;GeneCards:FGR;OMA:FGR - orthologs
Gene location (Human)
Chromosome 1 (human)
Chr.Chromosome 1 (human)[1]
Chromosome 1 (human)
Genomic location for FGR
Genomic location for FGR
Band1p35.3Start27,612,064bp[1]
End27,635,185bp[1]
Gene location (Mouse)
Chromosome 4 (mouse)
Chr.Chromosome 4 (mouse)[2]
Chromosome 4 (mouse)
Genomic location for FGR
Genomic location for FGR
Band4 D2.3|4 66.11 cMStart132,701,406bp[2]
End132,729,221bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • granulocyte

  • monocyte

  • blood

  • right lung

  • spleen

  • upper lobe of left lung

  • bone marrow cell

  • trabecular bone

  • appendix

  • lower lobe of lung
Top expressed in
  • granulocyte

  • tibiofemoral joint

  • blood

  • spleen

  • bone marrow

  • mesenteric lymph nodes

  • lumbar subsegment of spinal cord

  • oocyte

  • secondary oocyte

  • embryo
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

2268

14191

Ensembl

ENSG00000000938

ENSMUSG00000028874

UniProt

P09769

P14234

RefSeq (mRNA)

NM_001042729
NM_001042747
NM_005248

NM_010208

RefSeq (protein)

NP_001036194
NP_001036212
NP_005239

NP_034338

Location (UCSC)Chr 1: 27.61 – 27.64 MbChr 4: 132.7 – 132.73 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog, also known asFGR, is aprotein which in humans is encoded by theFGRgene.[5][6]

Function

[edit]

This gene is a member of the Src family of proteintyrosine kinases (PTKs). The encoded protein containsN-terminal sites formyristoylation andpalmitoylation, a PTK domain, andSH2 andSH3 domains which are involved in mediating protein-protein interactions with phosphotyrosine-containing and proline-rich motifs, respectively. The protein localizes to plasma membrane ruffles, and functions as a negative regulator of cellmigration andadhesion triggered by the beta-2integrin signal transduction pathway. Infection withEpstein–Barr virus results in the overexpression of this gene. Multiple alternatively spliced variants, encoding the same protein, have been identified.[6]

Discovery

[edit]

The feline version of this gene was discovered by Suraiya Rasheed, Murray Gardner, and co-workers.[7]

Interactions

[edit]

FGR (gene) has been shown tointeract withWiskott–Aldrich syndrome protein.[8][9][10]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000000938Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000028874Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Tronick SR, Popescu NC, Cheah MS, Swan DC, Amsbaugh SC, Lengel CR, DiPaolo JA, Robbins KC (Oct 1985)."Isolation and chromosomal localization of the human fgr protooncogene, a distinct member of the tyrosine kinase gene family".Proc. Natl. Acad. Sci. U.S.A.82 (19):6595–9.Bibcode:1985PNAS...82.6595T.doi:10.1073/pnas.82.19.6595.PMC 391256.PMID 2995972.
  6. ^ab"Entrez Gene: FGR Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog".
  7. ^Rasheed S, Barbacid M, Aaronson S, Gardner MB (Feb 1982). "Origin and biological properties of a new feline sarcoma virus".Virology.117 (1):238–44.doi:10.1016/0042-6822(82)90522-0.PMID 6175084.
  8. ^Banin S, Truong O, Katz DR, Waterfield MD, Brickell PM, Gout I (Aug 1996)."Wiskott-Aldrich syndrome protein (WASp) is a binding partner for c-Src family protein-tyrosine kinases".Current Biology.6 (8):981–8.Bibcode:1996CBio....6..981B.doi:10.1016/S0960-9822(02)00642-5.PMID 8805332.S2CID 162267.
  9. ^Finan PM, Soames CJ, Wilson L, Nelson DL, Stewart DM, Truong O, Hsuan JJ, Kellie S (Oct 1996)."Identification of regions of the Wiskott-Aldrich syndrome protein responsible for association with selected Src homology 3 domains"(PDF).The Journal of Biological Chemistry.271 (42):26291–5.doi:10.1074/jbc.271.42.26291.PMID 8824280.S2CID 1945958.
  10. ^Rivero-Lezcano OM, Marcilla A, Sameshima JH, Robbins KC (Oct 1995)."Wiskott-Aldrich syndrome protein physically associates with Nck through Src homology 3 domains".Molecular and Cellular Biology.15 (10):5725–31.doi:10.1128/MCB.15.10.5725.PMC 230823.PMID 7565724.

Further reading

[edit]
Growth factor receptors
EGF receptor family
Insulin receptor family
PDGF receptor family
FGF receptor family
VEGF receptors family
HGF receptor family
Trk receptor family
EPH receptor family
LTK receptor family
TIE receptor family
ROR receptor family
DDR receptor family
PTK7 receptor family
RYK receptor family
MuSK receptor family
ROS receptor family
AATYK receptor family
AXL receptor family
RET receptor family
uncategorised
ABL family
ACK family
CSK family
FAK family
FES family
FRK family
JAK family
SRC-A family
SRC-B family
TEC family
SYK family
Activity
Regulation
Classification
Kinetics
Types
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