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Eomesodermin

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens

EOMES
Identifiers
AliasesEOMES, TBR2, Eomesodermin
External IDsOMIM:604615;MGI:1201683;HomoloGene:3971;GeneCards:EOMES;OMA:EOMES - orthologs
Gene location (Human)
Chromosome 3 (human)
Chr.Chromosome 3 (human)[1]
Chromosome 3 (human)
Genomic location for EOMES
Genomic location for EOMES
Band3p24.1Start27,715,949bp[1]
End27,722,711bp[1]
Gene location (Mouse)
Chromosome 9 (mouse)
Chr.Chromosome 9 (mouse)[2]
Chromosome 9 (mouse)
Genomic location for EOMES
Genomic location for EOMES
Band9 70.21 cM|9 F3Start118,307,280bp[2]
End118,315,200bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • ganglionic eminence

  • ventricular zone

  • granulocyte

  • cerebellar vermis

  • cerebellar hemisphere

  • testicle

  • right hemisphere of cerebellum

  • lymph node

  • blood

  • spleen
Top expressed in
  • ventricular zone

  • olfactory bulb

  • epiblast

  • blastocyst

  • blastocyst

  • embryo

  • cerebellar vermis

  • mesoderm

  • blood

  • embryo
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

8320

13813

Ensembl

ENSG00000163508

ENSMUSG00000032446

UniProt

O95936

O54839

RefSeq (mRNA)

NM_001278182
NM_001278183
NM_005442

NM_001164789
NM_010136

RefSeq (protein)

NP_001265111
NP_001265112
NP_005433

NP_001158261
NP_034266

Location (UCSC)Chr 3: 27.72 – 27.72 MbChr 9: 118.31 – 118.32 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Eomesodermin also known asT-box brain protein 2 (Tbr2) is aprotein that in humans is encoded by theEOMESgene.[5]

A representation of the T box DNA binding domain

The Eomesodermin/Tbr2 gene,EOMES, encodes a member of aconserved protein family that shares a common DNA-binding domain, theT-box.[6] T-box genes encodetranscription factors, which controlgene expression, involved in the regulation of developmental processes. Eomesodermin/Tbr2 itself controls regulation ofradial glia, as well as other related cells.[6] Eomesodermin/Tbr2 has also been found to have a role inimmune response, and there exists some loose evidence for its connections in other systems.[7]

Nervous system development

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Neurogenesis

[edit]

Eomesodermin/Tbr2 is expressed highly in the intermediate progenitor stage of the developingneuron.[8] Neurons, the primary functional cells of the brain, are developed fromradial glia cells. This process of cells developing into other types of cells is calleddifferentiation. Radial glia are present in the ventricular zone of thebrain, which are on the lateral walls of thelateral ventricles.[9] Radial gliadivide and migrate towards the surface of the brain, the cerebralcortex. During this migration, there are three stages of cellular development: radial glia,intermediate progenitors, and postmitotic projection neurons.[8] Radial glia expressPax6, while intermediate progenitor cells express Eomesodermin/Tbr2, and postmitotic projection neurons expressTbr1.[8] This process, known asneurogenesis, occurs mainly in the developing cortex before the organism has fully developed, and thus Eomesodermin/Tbr2 has been implicated inneurodevelopment.

Microcephaly

Tbr2 has been observed in a transcription factor cascade to enable to development ofglutamatergic neurons. Pax6, as expressed by radial glia cells, activates the transcription ofNeurogenin-2 which then activates the generation of intermediate progenitor cells (IPC) expressing Tbr2. These cells are localized within thesubventricular zone. The IPCs then undergosymmetric division to produceNeuroD expressing cells that can differentiate inTBR1 neurons. Similar mechanisms have been observed in both embryonic and adult neurogenesis.[10]

Tbr2 inactivation has also been tied to deficiencies in cortical neurogenesis further suggesting the importance of the cascade in activating and maintaining neuron production.[11] It has been found experimentally throughknockout studies that mice lacking Eomesodermin/Tbr2 during early development have a reduced number of actively dividing cells, calledproliferating cells, in thesubventricular zone.[12] This, may lead to themicrocephaly (small head size due to improper brain development) seen in Eomesodermin/Tbr2 deficient mice.[12] Eomesodermin/Tbr2 lacking mice have smaller uppercortical layers and a smallersub ventricular zone in the brain, and have an absence of amitral cell (neurons involved in the olfactory pathway) layer, with mitral cells instead being scattered about.[12] Phenotypically, Eomesodermin/Tbr2 lacking mice show highanger levels and performinfanticide.[6] Eomesodermin/Tbr2 lacking mice also seem to have problems with longaxon connections.[12] Axons are projections from neurons that connect with other cells in what is called asynapse and sendneurotransmitters. In this way, they can communicate with other cells, and form the processing that allows are brains to function. Eomesodermin/Tbr2 lacking mice seem to lack fully formedcommissural fibers, which connect the twohemispheres of the brain, and lack thecorpus callosum, another region of the brain involved in hemisphere connections.[12]

Role in adult development

[edit]

There are locations within the brain that have been discovered to perform neurogenesis intoadulthood,[7][8] including the ventricular zone.[13] Thehippocampus, which is involved inmemory formation, shows decreased neurogenesis when Eomesodermin/Tbr2 is removed.[14] It was also found that Eomesodermin/Tbr2 functions by reducing amounts ofSox2, which is associated with radial glia.[14] Another study found that mice without Eomesodermin/Tbr2 lackedlong term memory formation, which may relate to Eomesodermin/Tbr2's effects on the hippocampus.[15]

Cardiac development

[edit]

Early in development, Eomesodermin/Tbr2 controls early differentiation of thecardiacmesoderm.[16] Lack of Eomesodermin/Tbr2 appears to be correlated with failure to differentiate intocardiomyocytes. Eomesodermin/Tbr2 controls the expression of cardiac specific genesMesp1,Myl7,Myl2,Myocardin, Nkx2.5 andMef2c.[16]

Immune response

[edit]

Eomesodermin/Tbr2 is highly expressed inCD8+ T cells, but notCD4+ T cells.[7] CD4+ T cells are the helperT cells which detect foreign particles in the body, and call CD8+ T cells to facilitate death of the foreign particles. Eomesodermin/Tbr2 was found to play a role in the anticancer properties of CD8+ T cells.[7] Lack of Eomesodermin/Tbr2, alongsideT bet, another T box protein, caused CD8+ T cells to not penetratetumors so they could perform their anti cancer duties.[7] Eomesodermin/Tbr2 prevents CD8+ cells from differentiating into other types of T cells, but does not play a role in the production of CD8+ T cells itself.[7]

See also

[edit]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000163508Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000032446Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^"Entrez Gene: Eomesodermin". Retrieved2011-11-01.
  6. ^abcArnold SJ, Huang GJ, Cheung AF, Era T, Nishikawa S, Bikoff EK, et al. (September 2008)."The T-box transcription factor Eomes/Tbr2 regulates neurogenesis in the cortical subventricular zone".Genes & Development.22 (18):2479–2484.doi:10.1101/gad.475408.PMC 2546697.PMID 18794345.
  7. ^abcdefZhu Y, Ju S, Chen E, Dai S, Li C, Morel P, et al. (September 2010)."T-bet and eomesodermin are required for T cell-mediated antitumor immune responses".Journal of Immunology.185 (6):3174–3183.doi:10.4049/jimmunol.1000749.PMID 20713880.
  8. ^abcdEnglund C, Fink A, Lau C, Pham D, Daza RA, Bulfone A, et al. (January 2005)."Pax6, Tbr2, and Tbr1 are expressed sequentially by radial glia, intermediate progenitor cells, and postmitotic neurons in developing neocortex".The Journal of Neuroscience.25 (1):247–251.doi:10.1523/JNEUROSCI.2899-04.2005.PMC 6725189.PMID 15634788.
  9. ^Quiñones-Hinojosa A, Sanai N, Soriano-Navarro M, Gonzalez-Perez O, Mirzadeh Z, Gil-Perotin S, et al. (January 2006). "Cellular composition and cytoarchitecture of the adult human subventricular zone: a niche of neural stem cells".The Journal of Comparative Neurology.494 (3):415–434.doi:10.1002/cne.20798.PMID 16320258.S2CID 11713373.
  10. ^Hodge RD, Kowalczyk TD, Wolf SA, Encinas JM, Rippey C, Enikolopov G, et al. (April 2008)."Intermediate progenitors in adult hippocampal neurogenesis: Tbr2 expression and coordinate regulation of neuronal output".The Journal of Neuroscience.28 (14):3707–3717.doi:10.1523/JNEUROSCI.4280-07.2008.PMC 6671086.PMID 18385329.
  11. ^Kowalczyk T, Pontious A, Englund C, Daza RA, Bedogni F, Hodge R, et al. (October 2009)."Intermediate neuronal progenitors (basal progenitors) produce pyramidal-projection neurons for all layers of cerebral cortex".Cerebral Cortex.19 (10):2439–2450.doi:10.1093/cercor/bhn260.PMC 2742596.PMID 19168665.
  12. ^abcdeSessa A, Mao CA, Hadjantonakis AK, Klein WH, Broccoli V (October 2008)."Tbr2 directs conversion of radial glia into basal precursors and guides neuronal amplification by indirect neurogenesis in the developing neocortex".Neuron.60 (1):56–69.doi:10.1016/j.neuron.2008.09.028.PMC 2887762.PMID 18940588.
  13. ^Ming GL, Song H (May 2011)."Adult neurogenesis in the mammalian brain: significant answers and significant questions".Neuron.70 (4):687–702.doi:10.1016/j.neuron.2011.05.001.PMC 3106107.PMID 21609825.
  14. ^abHodge RD, Nelson BR, Kahoud RJ, Yang R, Mussar KE, Reiner SL, et al. (May 2012)."Tbr2 is essential for hippocampal lineage progression from neural stem cells to intermediate progenitors and neurons".The Journal of Neuroscience.32 (18):6275–6287.doi:10.1523/JNEUROSCI.0532-12.2012.PMC 3366485.PMID 22553033.
  15. ^Knox JJ, Cosma GL, Betts MR, McLane LM (2014-05-14)."Characterization of T-bet and eomes in peripheral human immune cells".Frontiers in Immunology.5: 217.doi:10.3389/fimmu.2014.00217.PMC 4030168.PMID 24860576.
  16. ^abCostello I, Pimeisl IM, Dräger S, Bikoff EK, Robertson EJ, Arnold SJ (August 2011)."The T-box transcription factor Eomesodermin acts upstream of Mesp1 to specify cardiac mesoderm during mouse gastrulation".Nature Cell Biology.13 (9):1084–1091.doi:10.1038/ncb2304.PMC 4531310.PMID 21822279.

Further reading

[edit]
(1) Basic domains
(1.1) Basicleucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3)bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2)Zinc finger DNA-binding domains
(2.1)Nuclear receptor(Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3.1)Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3)Fork head /winged helix
(3.4)Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4)β-Scaffold factors with minor groove contacts
(4.1)Rel homology region
(4.2)STAT
(4.3) p53-like
(4.4)MADS box
(4.6)TATA-binding proteins
(4.7)High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3)Pocket domain
(0.5)AP-2/EREBP-related factors
(0.6) Miscellaneous

This article incorporates text from theUnited States National Library of Medicine, which is in thepublic domain.

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