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ELK3

From Wikipedia, the free encyclopedia
Protein-coding gene in humans
ELK3
Identifiers
AliasesELK3, ERP, NET, SAP2, SAP-2, ETS transcription factor, ETS transcription factor ELK3
External IDsOMIM:600247;MGI:101762;HomoloGene:3833;GeneCards:ELK3;OMA:ELK3 - orthologs
Gene location (Human)
Chromosome 12 (human)
Chr.Chromosome 12 (human)[1]
Chromosome 12 (human)
Genomic location for ELK3
Genomic location for ELK3
Band12q23.1Start96,194,375bp[1]
End96,269,824bp[1]
Gene location (Mouse)
Chromosome 10 (mouse)
Chr.Chromosome 10 (mouse)[2]
Chromosome 10 (mouse)
Genomic location for ELK3
Genomic location for ELK3
Band10 C2|10 48.04 cMStart93,083,276bp[2]
End93,146,997bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • bronchial epithelial cell

  • synovial joint

  • amniotic fluid

  • urethra

  • visceral pleura

  • vena cava

  • parietal pleura

  • oral cavity

  • mucosa of paranasal sinus

  • superficial temporal artery
Top expressed in
  • endothelial cell of lymphatic vessel

  • dermis

  • endocardial cushion

  • left lung lobe

  • atrioventricular valve

  • atrium

  • external carotid artery

  • decidua

  • vas deferens

  • semi-lunar valve
More reference expression data
BioGPS


More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

2004

13713

Ensembl

ENSG00000111145

ENSMUSG00000008398

UniProt

P41970

P41971

RefSeq (mRNA)

NM_001303511
NM_005230

NM_001282967
NM_013508
NM_205536
NM_001322265
NM_001322268

RefSeq (protein)

NP_001290440
NP_005221

NP_001269896
NP_001309194
NP_001309197
NP_038536

Location (UCSC)Chr 12: 96.19 – 96.27 MbChr 10: 93.08 – 93.15 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

ETS domain-containing protein Elk-3 is aprotein that in humans is encoded by theELK3gene.[5][6]

The protein encoded by this gene is a member of the ETS-domain transcription factor family and the ternary complex factor (TCF) subfamily. Proteins in this subfamily regulate transcription when recruited by serum response factor to bind to serum response elements. This protein is activated by signal-induced phosphorylation; studies in rodents suggest that it is a transcriptional inhibitor in the absence of Ras, but activates transcription when Ras is present.[6]

Interactions

[edit]

ELK3 has been shown tointeract withTCF3.[7]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000111145Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000008398Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Shipley J, Sheer D, Dalton S, Treisman R, Patel K (Mar 1995). "Mapping of the human SAP1 (SRF accessory protein 1) gene and SAP2, a gene encoding a related protein, to chromosomal bands 1q32 and 12q23, respectively".Genomics.23 (3):710–1.doi:10.1006/geno.1994.1564.PMID 7851904.
  6. ^ab"Entrez Gene: ELK3 ELK3, ETS-domain protein (SRF accessory protein 2)".
  7. ^Maira, S M; Wurtz J M; Wasylyk B (Nov 1996)."Net (ERP/SAP2) one of the Ras-inducible TCFs, has a novel inhibitory domain with resemblance to the helix-loop-helix motif".EMBO J.15 (21). ENGLAND:5849–65.doi:10.1002/j.1460-2075.1996.tb00972.x.ISSN 0261-4189.PMC 452333.PMID 8918463.

Further reading

[edit]

External links

[edit]

This article incorporates text from theUnited States National Library of Medicine, which is in thepublic domain.

(1) Basic domains
(1.1) Basicleucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3)bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2)Zinc finger DNA-binding domains
(2.1)Nuclear receptor(Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3.1)Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3)Fork head /winged helix
(3.4)Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4)β-Scaffold factors with minor groove contacts
(4.1)Rel homology region
(4.2)STAT
(4.3) p53-like
(4.4)MADS box
(4.6)TATA-binding proteins
(4.7)High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3)Pocket domain
(0.5)AP-2/EREBP-related factors
(0.6) Miscellaneous


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