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Complement component 9

From Wikipedia, the free encyclopedia

Protein found in humans
C9
Available structures
PDBOrtholog search:PDBeRCSB
List of PDB id codes

5FMW

Identifiers
AliasesC9, ARMD15, C9D, complement component 9, complement C9
External IDsOMIM:120940;MGI:1098282;HomoloGene:74406;GeneCards:C9;OMA:C9 - orthologs
Gene location (Human)
Chromosome 5 (human)
Chr.Chromosome 5 (human)[1]
Chromosome 5 (human)
Genomic location for C9
Genomic location for C9
Band5p13.1Start39,284,140bp[1]
End39,371,324bp[1]
Gene location (Mouse)
Chromosome 15 (mouse)
Chr.Chromosome 15 (mouse)[2]
Chromosome 15 (mouse)
Genomic location for C9
Genomic location for C9
Band15|15 A1Start6,474,808bp[2]
End6,528,232bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • right lobe of liver

  • testicle

  • gonad

  • buccal mucosa cell

  • human kidney

  • corpus epididymis

  • stromal cell of endometrium

  • right adrenal gland

  • right adrenal cortex

  • right coronary artery
Top expressed in
  • left lobe of liver

  • gallbladder

  • olfactory epithelium

  • embryo

  • blastocyst

  • embryo

  • yolk sac

  • precursor cell

  • migratory enteric neural crest cell

  • thoracic diaphragm
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

735

12279

Ensembl

ENSG00000113600

ENSMUSG00000022149

UniProt

P02748

P06683

RefSeq (mRNA)

NM_001737

NM_013485
NM_001368420
NM_001368421

RefSeq (protein)

NP_001728

NP_038513
NP_001355349
NP_001355350

Location (UCSC)Chr 5: 39.28 – 39.37 MbChr 15: 6.47 – 6.53 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Complement component 9 (C9) is aMACPFprotein involved in thecomplement system, which is part of theinnate immune system.[5] Once activated, about 12-18 molecules of C9 polymerize to form pores in targetcell membranes, causinglysis and cell death.[6] C9 is one member of thecomplement membrane attack complex (MAC), which also includes complement componentsC5b,C6,C7 andC8.[7][8][9]  The formation of the MAC occurs through three distinct pathways: the classical, alternative, and lectin pathways.[7] Pore formation by C9 is an important way that bacterial cells are killed during an infection, and the target cell is often covered in multiple MACs. The clinical impact of a deficiency in C9 is an infection with the gram-negative bacteriumNeisseria meningitidis.[10]

Structure

[edit]

C9 genes include 11exons and 10introns when found in fish.[11] In fish, the liver is the site where the majority of complement components are produced and expressed, but C9 can also be found in other tissues.[11] It is a single-chain glycoprotein with a four domain structure arranged in a globular bundle.[10][11]

Pore formation

[edit]

MAC formation starts with the assembly of a tetrameric complex with the complement components C6, C7, C8, and C5b.[12] The final step of MAC on target cell surfaces involves the polymerization of C9 molecules bound to C5b8 forming C5b-9.[8][10][11] C9 molecules allow cylindrical, asymmetrical transmembrane pores to form. The overall complex belongs to MAC/perforin-like (MACPF)/CDC superfamily.[6] Pore formation involves binding the C9 molecules to the target membrane, membrane molecules forming a pre-pore shape, and conformational change in the TMH1, the first transmembrane region, and TMH2, the second transmembrane region.[8] The formations of pores leads to the killing of foreign pathogens and infected host cells.

Relation to aging process

[edit]

C9 was found to be the most strongly under expressed serum protein in men who achieved longevity, compared to men who did not.[13]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000113600Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000022149Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Lint TF, Zeitz HJ, Gewurz H (November 1980)."Inherited deficiency of the ninth component of complement in man".Journal of Immunology.125 (5):2252–7.doi:10.4049/jimmunol.125.5.2252.PMID 7430628.
  6. ^abDudkina NV, Spicer BA, Reboul CF, Conroy PJ, Lukoyanova N, Elmlund H, et al. (February 2016)."Structure of the poly-C9 component of the complement membrane attack complex".Nature Communications.7 (1) 10588.Bibcode:2016NatCo...710588D.doi:10.1038/ncomms10588.PMC 4742998.PMID 26841934.
  7. ^abMohapatra A, Das S, Dey S, Sahoo PK (April 2020)."Molecular characterization and induced expression analysis of the terminal complement component C9 in rohu, Labeo rohita".Aquaculture Research.51 (4):1415–1427.doi:10.1111/are.14487.ISSN 1355-557X.S2CID 213565293.
  8. ^abcSpicer BA, Law RH, Caradoc-Davies TT, Ekkel SM, Bayly-Jones C, Pang SS, et al. (August 2018)."The first transmembrane region of complement component-9 acts as a brake on its self-assembly".Nature Communications.9 (1): 3266.Bibcode:2018NatCo...9.3266S.doi:10.1038/s41467-018-05717-0.PMC 6093860.PMID 30111885.
  9. ^Wickramaarachchi WD, Wan Q, Lee Y, Lim BS, De Zoysa M, Oh MJ, et al. (October 2012). "Genomic characterization and expression analysis of complement component 9 in rock bream (Oplegnathus fasciatus)".Fish & Shellfish Immunology.33 (4):707–17.doi:10.1016/j.fsi.2012.06.019.PMID 22796422.
  10. ^abcFu X, Ju J, Lin Z, Xiao W, Li X, Zhuang B, et al. (July 2016)."Target deletion of complement component 9 attenuates antibody-mediated hemolysis and lipopolysaccharide (LPS)-induced acute shock in mice".Scientific Reports.6 (1) 30239.Bibcode:2016NatSR...630239F.doi:10.1038/srep30239.PMC 4957234.PMID 27444648.
  11. ^abcdLi L, Chang MX, Nie P (August 2007). "Molecular cloning, promoter analysis and induced expression of the complement component C9 gene in the grass carp Ctenopharyngodon idella".Veterinary Immunology and Immunopathology.118 (3–4):270–82.doi:10.1016/j.vetimm.2007.05.005.PMID 17604124.
  12. ^Fu YW, Zhu CK, Zhang QZ (May 2019). "Molecular characterization and expression analysis of complement components C3 and C9 in largemouth bronze gudgeon (Coreius guichenoti) in response to Ichthyophthirius multifiliis infection".Aquaculture.506:270–279.Bibcode:2019Aquac.506..270F.doi:10.1016/j.aquaculture.2019.03.046.S2CID 133378035.
  13. ^Orwoll E, Wiedrick J, Nielson C, et al. (2020)."Proteomic assessment of serum biomarkers of longevity in older men".Aging Cell.19 (11) e13253.doi:10.1111/acel.13253.PMC 7681066.PMID 33078901.

External links

[edit]
Pathways
Activators/enzymes
Early
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Late
Inhibitors
Complement receptors
Function
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