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Clp protease family

From Wikipedia, the free encyclopedia
A protein-targeting ATP-dependent enzyme family.
Protein family
CLP_protease
crystal structure of the clpp protease catalytic domain from plasmodium falciparum
Identifiers
SymbolCLP_protease
PfamPF00574
Pfam clanCL0127
InterProIPR001907
PROSITEPDOC00358
MEROPSS14
SCOP21tyf /SCOPe /SUPFAM
CDDcd00394
Available protein structures:
Pfam  structures /ECOD  
PDBRCSB PDB;PDBe;PDBj
PDBsumstructure summary

In molecular biology, theCLP protease family is a family ofserine peptidases belong to theMEROPS peptidase family S14 (ClpPendopeptidase family, clan SK). ClpP is anATP-dependentprotease that cleaves a number ofproteins, such ascasein andalbumin.[1] It exists as aheterodimer of ATP-binding regulatory A and catalytic P subunits, both of which are required for effective levels of protease activity in the presence of ATP,[1] although the P subunit alone does possess some catalytic activity.

Proteases highly similar to ClpP have been found to be encoded in the genome ofbacteria, in themitochondria ofmetazoa, someviruses and in thechloroplast ofplants. A number of theproteins in this family are classified as non-peptidasehomologues as they have been found experimentally to be without peptidase activity, or lackamino acid residues that are believed to be essential for catalytic activity.

Mutations in mitochondrial CLPP are associated withPerrault syndrome[2][3][4][5] and cause a variety of molecular defects, from the loss of ATPase docking, to the activation or inhibition of peptidase activity.[3][6]

See also

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References

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  1. ^abMaurizi MR, Clark WP, Katayama Y, Rudikoff S, Pumphrey J, Bowers B, Gottesman S (July 1990)."Sequence and structure of Clp P, the proteolytic component of the ATP-dependent Clp protease of Escherichia coli".The Journal of Biological Chemistry.265 (21):12536–45.doi:10.1016/S0021-9258(19)38378-4.PMID 2197275.
  2. ^Newman, W. G.; Friedman, T. B.; Conway, G. S.; Demain LAM; Adam, M. P.; Ardinger, H. H.; Pagon, R. A.; Wallace, S. E.; Bean LJH; Stephens, K.; Amemiya, A. (1993). Adam, Margaret P.; Ardinger, Holly H.; Pagon, Roberta A.; Wallace, Stephanie E. (eds.)."Perrault Syndrome".GeneReviews. Seattle (WA): University of Washington, Seattle.PMID 25254289. Retrieved2020-11-18.
  3. ^abJenkinson EM, Rehman AU, Walsh T, Clayton-Smith J, Lee K, Morell RJ, et al. (April 2013)."Perrault syndrome is caused by recessive mutations in CLPP, encoding a mitochondrial ATP-dependent chambered protease".American Journal of Human Genetics.92 (4):605–13.doi:10.1016/j.ajhg.2013.02.013.PMC 3617381.PMID 23541340.
  4. ^Ahmed S, Jelani M, Alrayes N, Mohamoud HS, Almramhi MM, Anshasi W, et al. (June 2015). "Exome analysis identified a novel missense mutation in the CLPP gene in a consanguineous Saudi family expanding the clinical spectrum of Perrault Syndrome type-3".Journal of the Neurological Sciences.353 (1–2):149–54.doi:10.1016/j.jns.2015.04.038.PMID 25956234.S2CID 6053528.
  5. ^Dursun F, Mohamoud HS, Karim N, Naeem M, Jelani M, Kırmızıbekmez H (December 2016)."A Novel Missense Mutation in the CLPP Gene Causing Perrault Syndrome Type 3 in a Turkish Family".Journal of Clinical Research in Pediatric Endocrinology.8 (4):472–477.doi:10.4274/jcrpe.2717.PMC 5198008.PMID 27087618.
  6. ^Brodie EJ, Zhan H, Saiyed T, Truscott KN, Dougan DA (August 2018)."Perrault syndrome type 3 caused by diverse molecular defects in CLPP".Scientific Reports.8 (1): 12862.Bibcode:2018NatSR...812862B.doi:10.1038/s41598-018-30311-1.PMC 6110781.PMID 30150665.

External links

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This article incorporates text from the public domainPfam andInterPro:IPR001907
Authority control databases: NationalEdit this at Wikidata
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