TheX chromosome is one of the twosex chromosomes in many organisms, including mammals, and is found in both males and females. It is a part of theXY sex-determination system andXO sex-determination system. The X chromosome was named for its unique properties by early researchers, which resulted in the naming of its counterpartY chromosome, for the next letter in the alphabet, following its subsequent discovery.[3]
It was first noted that the X chromosome was special in 1890 byHermann Henking in Leipzig. Henking was studying the testicles of Pyrrhocoris and noticed that one chromosome did not take part inmeiosis. Chromosomes are so named because of their ability to take upstaining (chroma in Greek meanscolor). Although the X chromosome could be stained just as well as the others, Henking was unsure whether it was a different class of the object and consequently named itX element,[4] which later became X chromosome after it was established that it was indeed a chromosome.[5]
The idea that the X chromosome was named after its similarity to the letter "X" is mistaken. All chromosomes normally appear as an amorphous blob under the microscope and take on a well-defined shape only during mitosis. This shape is vaguely X-shaped for all chromosomes. It is entirely coincidental that theY chromosome, duringmitosis, has two very short branches which can look merged under the microscope and appear as the descender of a Y-shape.[6]
It was first suggested that the X chromosome was involved in sex determination byClarence Erwin McClung in 1901. After comparing his work onlocusts with Henking's and others, McClung noted that only half the sperm received an X chromosome. He called this chromosome anaccessory chromosome, and insisted (correctly) that it was aproper chromosome, and theorized (incorrectly) that it was the male-determining chromosome.[4]
Nucleus of a female amniotic fluid cell. Top: Both X-chromosome territories are detected byFISH. Shown is a single optical section made with aconfocal microscope. Bottom: Same nucleus stained withDAPI and recorded with aCCD camera. The Barr body is indicated by the arrow, it identifies the inactive X (Xi).
The X chromosome in humans spans more than 153 millionbase pairs (the building material ofDNA). It represents about 800 protein-coding genes compared to the Y chromosome containing about 107 protein-coding genes (42 exclusive protein-coding genes),[7] out of 20,000–25,000 total genes in the human genome.Each person usually has one pair of sex chromosomes in each cell. Females typically have two X chromosomes, whereas males typically have one X and oneY chromosome. Both males and females retain one of their mother's X chromosomes, and females retain their second X chromosome from their father. Since the father retains his X chromosome from his mother, a human female has one X chromosome from her paternal grandmother (father's side), and one X chromosome from her mother. This inheritance patternfollows the Fibonacci numbers at a given ancestral depth[8][a]
Genetic disorders that are due tomutations in genes on the X chromosome are described asX linked. If the X chromosome has a genetic disease gene, it always causes illness in male patients, since males have only one X chromosome and therefore only one copy of each gene. Females, instead, require both X chromosomes to have the illness, and as a result could potentially only be a carrier of genetic illness, since their second X chromosome overrides the first. For example,hemophilia A andB andcongenital red–green color blindness run in families this way.
The X chromosome carries hundreds of genes but few, if any, of these have anything to do directly with sex determination. Early inembryonic development in females, one of the two X chromosomes is permanently inactivated in nearly all somatic cells (cells other thanegg andsperm cells). This phenomenon is calledX-inactivation orLyonization, and creates aBarr body. If X-inactivation in the somatic cell meant a complete de-functionalizing of one of the X-chromosomes, it would ensure that females, like males, had only one functional copy of the X chromosome in each somatic cell. This was previously assumed to be the case. However, recent research suggests that theBarr body may be more biologically active than was previously supposed.[9]
The partialinactivation of the X-chromosome is due to repressiveheterochromatin that compacts the DNA and prevents the expression of most genes. Heterochromatin compaction is regulated by Polycomb Repressive Complex 2 (PRC2).[10]
The following are some of the gene count estimates of human X chromosome. Because researchers use different approaches togenome annotation their predictions of thenumber of genes on each chromosome varies (for technical details, seegene prediction). Among various projects, the collaborative consensus coding sequence project (CCDS) takes an extremely conservative strategy. So CCDS's gene number prediction represents a lower bound on the total number of human protein-coding genes.[11]
It is theorized by Ross et al. 2005 and Ohno 1967 that the X chromosome is at least partially derived from the autosomal (non-sex-related) genome of other mammals, evidenced from interspecies genomic sequence alignments.
The X chromosome is notably larger and has a more activeeuchromatin region than itsY chromosome counterpart. Further comparison of the X and Y reveal regions of homology between the two. However, the corresponding region in the Y appears far shorter and lacks regions that are conserved in the X throughout primate species, implying a genetic degeneration for Y in that region. Because males have only one X chromosome, they are more likely to have an X chromosome-related disease.
It is estimated that about 10% of the genes encoded by the X chromosome are associated with a family of "CT" genes, so named because they encode for markers found in both tumor cells (in cancer patients) as well as in the humantestis (in healthy patients).[19]
Klinefelter syndrome is caused by the presence of one or more extra copies of the X chromosome in a male's cells.
Males with Klinefelter syndrome typically have one extra copy of the X chromosome in each cell, for a total of two X chromosomes and one Y chromosome (47,XXY). It is less common for affected males to have two or three extra X chromosomes (48,XXXY or 49,XXXXY) or extra copies of both the X and Y chromosomes (48,XXYY) in each cell. The extra genetic material may lead to tall stature, learning and reading disabilities, and other medical problems. Each extra X chromosome lowers the child'sIQ by about 15 points,[20][21] which means that the average IQ in Klinefelter syndrome is in general in the normal range, although below average. When additional X and/or Y chromosomes are present in 48,XXXY, 48,XXYY, or 49,XXXXY, developmental delays and cognitive difficulties can be more severe and mildintellectual disability may be present.
Klinefelter syndrome can also result from an extra X chromosome in only some of the body's cells. These cases are called mosaic 46,XY/47,XXY.
This syndrome results from an extra copy of the X chromosome in each of a female's cells. Females with trisomy X have three X chromosomes, for a total of 47 chromosomes per cell. The averageIQ of females with this syndrome is 90, while the averageIQ of unaffected siblings is 100.[22] Their stature on average is taller than normal females. They are fertile and their children do not inherit the condition.[23]
Females with more than one extra copy of the X chromosome (48,tetrasomy X or 49,pentasomy X) have been identified, but these conditions are rare.
This results when each of a female's cells has one normal X chromosome and the other sex chromosome is missing or altered. The missing genetic material affects development and causes the features of the condition, including short stature and infertility.
About half of individuals with Turner syndrome havemonosomy X (45,X), which means each cell in a woman's body has only one copy of the X chromosome instead of the usual two copies. Turner syndrome can also occur if one of the sex chromosomes is partially missing or rearranged rather than completely missing. Some women with Turner syndrome have a chromosomal change in only some of their cells. These cases are called Turner syndrome mosaics (45,X/46,XX).
XX male syndrome is a rare disorder, where theSRY region of the Y chromosome has recombined to be located on one of the X chromosomes. As a result, the XX combination after fertilization has the same effect as a XY combination, resulting in a male. However, the other genes of the X chromosome cause feminization as well.
Adrenoleukodystrophy, a rare and fatal disorder that is carried by the mother on the x-cell. It affects only boys between the ages of 5 and 10 and destroys the protective cell surrounding the nerves,myelin, in the brain. The female carrier hardly shows any symptoms because females have a copy of the x-cell. This disorder causes a once healthy boy to lose all abilities to walk, talk, see, hear, and even swallow. Within 2 years after diagnosis, most boys with Adrenoleukodystrophy die.
G-banding ideogram of human X chromosome in resolution 850 bphs. Band length in this diagram is proportional to base-pair length. This type of ideogram is generally used in genome browsers (e.g.Ensembl,UCSC Genome Browser).G-banding patterns of human X chromosome in three different resolutions (400,[25] 550[26] and 850[2] Band length in this diagram is based on the ideograms from ISCN (2013).[27] This type of ideogram represents actual relative band length observed under a microscope at the different moments during themitotic process.[28]
G-bands of human X chromosome in resolution 850 bphs[2]
^Luke Hutchison noticed that a number of possible ancestors on the X chromosome inheritance line at a given ancestral generation follows theFibonacci sequence.[8] A male individual has an X chromosome, which he received from his mother, and aY chromosome, which he received from his father. The male counts as the "origin" of his own X chromosome (), and at his parents' generation, his X chromosome came from a single parent (). The male's mother received one X chromosome from her mother (the son's maternal grandmother), and one from her father (the son's maternal grandfather), so two grandparents contributed to the male descendant's X chromosome (). The maternal grandfather received his X chromosome from his mother, and the maternal grandmother received X chromosomes from both of her parents, so three great-grandparents contributed to the male descendant's X chromosome (). Five great-great-grandparents contributed to the male descendant's X chromosome (), etc. (Note that this assumes that all ancestors of a given descendant are independent, but if any genealogy is traced far enough back in time, ancestors begin to appear on multiple lines of the genealogy, until eventually, apopulation founder appears on all lines of the genealogy.).
Earlier versions of this article contain material from theNational Library of Medicine, a part of the National Institutes of Health (USA), which, as a US government publication, is in the public domain.
^Harold Chen; Ian Krantz; Mary L Windle; Margaret M McGovern; Paul D Petry; Bruce Buehler (2013-02-22)."Klinefelter Syndrome Pathophysiology".Medscape. Retrieved2014-07-18.
^Bender B, Puck M, Salbenblatt J, Robinson A (1986). Smith S (ed.).Cognitive development of children with sex chromosome abnormalities. San Diego: College Hill Press. pp. 175–201.
^For cytogenetic banding nomenclature, see articlelocus.
^abThese values (ISCN start/stop) are based on the length of bands/ideograms from the ISCN book, An International System for Human Cytogenetic Nomenclature (2013).Arbitrary unit.
^gpos: Region which is positively stained byG banding, generallyAT-rich and gene poor;gneg: Region which is negatively stained by G banding, generallyCG-rich and gene rich;acenCentromere.var: Variable region;stalk: Stalk.
