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Cathepsin B

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens
For the Canadian agency, seeTransportation Safety Board of Canada.

CTSB
Available structures
PDBOrtholog search:PDBeRCSB
List of PDB id codes

3PBH,1CSB,1GMY,1HUC,1PBH,2IPP,2PBH,3AI8,3CBJ,3CBK,3K9M

Identifiers
AliasesCTSB, APPS, CPSB, cathepsin B, RECEUP
External IDsOMIM:116810;MGI:88561;HomoloGene:37550;GeneCards:CTSB;OMA:CTSB - orthologs
Gene location (Human)
Chromosome 8 (human)
Chr.Chromosome 8 (human)[1]
Chromosome 8 (human)
Genomic location for CTSB
Genomic location for CTSB
Band8p23.1Start11,842,524bp[1]
End11,869,448bp[1]
Gene location (Mouse)
Chromosome 14 (mouse)
Chr.Chromosome 14 (mouse)[2]
Chromosome 14 (mouse)
Genomic location for CTSB
Genomic location for CTSB
Band14 D1|14 33.24 cMStart63,359,911bp[2]
End63,383,372bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • stromal cell of endometrium

  • right lobe of thyroid gland

  • left lobe of thyroid gland

  • appendix

  • canal of the cervix

  • gallbladder

  • ectocervix

  • smooth muscle tissue

  • olfactory zone of nasal mucosa

  • monocyte
Top expressed in
  • stroma of bone marrow

  • calvaria

  • white adipose tissue

  • subcutaneous adipose tissue

  • epithelium of stomach

  • brown adipose tissue

  • tibiofemoral joint

  • tunica adventitia of aorta

  • decidua

  • lactiferous gland
More reference expression data
BioGPS




More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

1508

13030

Ensembl

ENSG00000164733
ENSG00000285132

ENSMUSG00000021939

UniProt

P07858

P10605

RefSeq (mRNA)
NM_001908
NM_147780
NM_147781
NM_147782
NM_147783

NM_001317237

NM_007798

RefSeq (protein)
NP_001304166
NP_001899
NP_680090
NP_680091
NP_680092

NP_680093

NP_031824

Location (UCSC)Chr 8: 11.84 – 11.87 MbChr 14: 63.36 – 63.38 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Cathepsin B belongs to afamily oflysosomalcysteine proteases known as thecysteine cathepsins and plays an important role in intracellular proteolysis.[5] In humans, cathepsin B is encoded by theCTSBgene.[6][7] Cathepsin B is upregulated in certain cancers, in pre-malignant lesions, and in various other pathological conditions.[8][9][10][11]

Structure

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Gene

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TheCTSB gene is located atchromosome 8p22, consisting of 13exons. The promoter of CTSB gene contains a GC-rich region including many SP1 sites, which is similar tohousekeeping genes.[12] At least five transcript variants encoding the same protein have been found for this gene.[13]

Protein

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Cathepsin B is synthesized on therough endoplasmic reticulum as a preproenzyme of 339amino acids with a signal peptide of 17 amino acids.[14][15] Procathepsin B of 43/46 kDa is then transported to theGolgi apparatus, where cathepsin B is formed. Mature cathepsin B is composed of a heavy chain of 25-26 kDa and a light chain of 5kDa, which are linked by a dimer of disulfide.

Function

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Cathepsin B may enhance the activity of other proteases, includingmatrix metalloproteinase,urokinase (serine protease urokinase plasminogen activator), andcathepsin D,[16][17] and thus it has an essential position for the proteolysis of extracellular matrix components, intercellular communication disruption, and reduced protease inhibitor expression.[11]

Cells may become carcinogenic when cathepsin B is unregulated.[18]

Potential in disease

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Cathepsin B has been proposed as a potentially effective biomarker for a variety ofcancers.[16][19] Overexpression of cathepsin B is correlated with invasive and metastatic cancers.[20]

Cathepsin B has been shown to be involved in thepathogenesis ofpancreatitis, by prematurely activating the digestive enzymetrypsinogen within the pancreas, leading toautodigestion ofacinar cells.[21][22][23]

Interactions

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Cathepsin B has been shown tointeract with:

Cathepsin B isinhibited by:

See also

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References

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  1. ^abcENSG00000285132 GRCh38: Ensembl release 89: ENSG00000164733, ENSG00000285132Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000021939Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Sloane BF (April 1990). "Cathepsin B and cystatins: evidence for a role in cancer progression".Seminars in Cancer Biology.1 (2):137–152.PMID 2103490.
  6. ^Chan SJ, San Segundo B, McCormick MB, Steiner DF (October 1986)."Nucleotide and predicted amino acid sequences of cloned human and mouse preprocathepsin B cDNAs".Proceedings of the National Academy of Sciences of the United States of America.83 (20):7721–7725.Bibcode:1986PNAS...83.7721C.doi:10.1073/pnas.83.20.7721.PMC 386793.PMID 3463996.
  7. ^Cao L, Taggart RT, Berquin IM, Moin K, Fong D,Sloane BF (February 1994). "Human gastric adenocarcinoma cathepsin B: isolation and sequencing of full-length cDNAs and polymorphisms of the gene".Gene.139 (2):163–169.doi:10.1016/0378-1119(94)90750-1.PMID 8112600.
  8. ^Tong B, Wan B, Wei Z, Wang T, Zhao P, Dou Y, et al. (September 2014)."Role of cathepsin B in regulating migration and invasion of fibroblast-like synoviocytes into inflamed tissue from patients with rheumatoid arthritis".Clinical and Experimental Immunology.177 (3):586–597.doi:10.1111/cei.12357.PMC 4137842.PMID 24749816.
  9. ^Lai WF, Chang CH, Tang Y, Bronson R, Tung CH (March 2004)."Early diagnosis of osteoarthritis using cathepsin B sensitive near-infrared fluorescent probes".Osteoarthritis and Cartilage.12 (3):239–244.doi:10.1016/j.joca.2003.11.005.PMID 14972341.
  10. ^Ha SD, Ham B, Mogridge J, Saftig P, Lin S, Kim SO (January 2010)."Cathepsin B-mediated autophagy flux facilitates the anthrax toxin receptor 2-mediated delivery of anthrax lethal factor into the cytoplasm".The Journal of Biological Chemistry.285 (3):2120–2129.doi:10.1074/jbc.M109.065813.PMC 2804368.PMID 19858192.
  11. ^abYang WE, Ho CC, Yang SF, Lin SH, Yeh KT, Lin CW, et al. (2016)."Cathepsin B Expression and the Correlation with Clinical Aspects of Oral Squamous Cell Carcinoma".PLOS ONE.11 (3) e0152165.Bibcode:2016PLoSO..1152165Y.doi:10.1371/journal.pone.0152165.PMC 4816521.PMID 27031837.
  12. ^Qian F, Frankfater A, Chan SJ, Steiner DF (April 1991). "The structure of the mouse cathepsin B gene and its putative promoter".DNA and Cell Biology.10 (3):159–168.doi:10.1089/dna.1991.10.159.PMID 2012677.
  13. ^"Entrez Gene: CTSB cathepsin B".
  14. ^Kirschke H, Barrett AJ, Rawlings ND (1995). "Proteinases 1: lysosomal cysteine proteinases".Protein Profile.2 (14):1581–1643.PMID 8771190.
  15. ^Mort JS, Buttle DJ (May 1997). "Cathepsin B".The International Journal of Biochemistry & Cell Biology.29 (5):715–720.doi:10.1016/s1357-2725(96)00152-5.PMID 9251238.S2CID 37767552.
  16. ^abAlapati K, Kesanakurti D, Rao JS, Dasari VR (May 2014)."uPAR and cathepsin B-mediated compartmentalization of JNK regulates the migration of glioma-initiating cells".Stem Cell Research.12 (3):716–729.doi:10.1016/j.scr.2014.02.008.PMC 4061617.PMID 24699410.
  17. ^Vigneswaran N, Zhao W, Dassanayake A, Muller S, Miller DM, Zacharias W (August 2000). "Variable expression of cathepsin B and D correlates with highly invasive and metastatic phenotype of oral cancer".Human Pathology.31 (8):931–937.doi:10.1053/hupa.2000.9035.PMID 10987253.
  18. ^Aggarwal N, Sloane BF (June 2014)."Cathepsin B: multiple roles in cancer".Proteomics. Clinical Applications.8 (5–6):427–437.doi:10.1002/prca.201300105.PMC 4205946.PMID 24677670.
  19. ^Bian B, Mongrain S, Cagnol S, Langlois MJ, Boulanger J, Bernatchez G, et al. (May 2016)."Cathepsin B promotes colorectal tumorigenesis, cell invasion, and metastasis".Molecular Carcinogenesis.55 (5):671–687.doi:10.1002/mc.22312.PMC 4832390.PMID 25808857.
  20. ^Ruan J, Zheng H, Rong X, Rong X, Zhang J, Fang W, et al. (February 2016)."Over-expression of cathepsin B in hepatocellular carcinomas predicts poor prognosis of HCC patients".Molecular Cancer.15 17.doi:10.1186/s12943-016-0503-9.PMC 4761221.PMID 26896959.
  21. ^Saluja A, Dudeja V, Dawra R, Sah RP (May 2019). "Early Intra-Acinar Events in Pathogenesis of Pancreatitis".Gastroenterology.156 (7):1979–1993.doi:10.1053/j.gastro.2019.01.268.PMID 30776339.
  22. ^Hirota M, Ohmuraya M, Hashimoto D, Suyama K, Sugita H, Ogawa M (April 2020). "Roles of Autophagy and Pancreatic Secretory Trypsin Inhibitor in Trypsinogen Activation in Acute Pancreatitis".Pancreas.49 (4):493–497.doi:10.1097/MPA.0000000000001519.PMID 32282761.
  23. ^Reinheckel T, Deussing J, Roth W, Peters C (May 2001). "Towards specific functions of lysosomal cysteine peptidases: phenotypes of mice deficient for cathepsin B or cathepsin L".Biological Chemistry.382 (5):735–741.doi:10.1515/BC.2001.089.PMID 11517926.
  24. ^van der Stappen JW, Williams AC, Maciewicz RA, Paraskeva C (August 1996)."Activation of cathepsin B, secreted by a colorectal cancer cell line requires low pH and is mediated by cathepsin D".International Journal of Cancer.67 (4):547–554.doi:10.1002/(SICI)1097-0215(19960807)67:4<547::AID-IJC14>3.0.CO;2-4.PMID 8759615.
  25. ^abPavlova A, Björk I (September 2003). "Grafting of features of cystatins C or B into the N-terminal region or second binding loop of cystatin A (stefin A) substantially enhances inhibition of cysteine proteinases".Biochemistry.42 (38):11326–11333.doi:10.1021/bi030119v.PMID 14503883.
  26. ^Estrada S, Nycander M, Hill NJ, Craven CJ, Waltho JP, Björk I (May 1998). "The role of Gly-4 of human cystatin A (stefin A) in the binding of target proteinases. Characterization by kinetic and equilibrium methods of the interactions of cystatin A Gly-4 mutants with papain, cathepsin B, and cathepsin L".Biochemistry.37 (20):7551–7560.doi:10.1021/bi980026r.PMID 9585570.
  27. ^Pol E, Björk I (September 2001)."Role of the single cysteine residue, Cys 3, of human and bovine cystatin B (stefin B) in the inhibition of cysteine proteinases".Protein Science.10 (9):1729–1738.doi:10.1110/ps.11901.PMC 2253190.PMID 11514663.
  28. ^Mai J, Finley RL, Waisman DM, Sloane BF (April 2000)."Human procathepsin B interacts with the annexin II tetramer on the surface of tumor cells".The Journal of Biological Chemistry.275 (17):12806–12812.doi:10.1074/jbc.275.17.12806.PMID 10777578.
  29. ^Hurley EA, Thorley-Lawson DA (December 1988)."B cell activation and the establishment of Epstein-Barr virus latency".The Journal of Experimental Medicine.168 (6):2059–2075.doi:10.1084/jem.168.6.2059.PMC 2189139.PMID 2848918.
  30. ^Murata M, Miyashita S, Yokoo C, Tamai M, Hanada K, Hatayama K, et al. (March 1991)."Novel epoxysuccinyl peptides. Selective inhibitors of cathepsin B, in vitro".FEBS Letters.280 (2):307–310.Bibcode:1991FEBSL.280..307M.doi:10.1016/0014-5793(91)80318-w.PMID 2013328.S2CID 46523390.

Further reading

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External links

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PDB gallery
  • 1csb: CRYSTAL STRUCTURE OF CATHEPSIN B INHIBITED WITH CA030 AT 2.1 ANGSTROMS RESOLUTION: A BASIS FOR THE DESIGN OF SPECIFIC EPOXYSUCCINYL INHIBITORS
    1csb: CRYSTAL STRUCTURE OF CATHEPSIN B INHIBITED WITH CA030 AT 2.1 ANGSTROMS RESOLUTION: A BASIS FOR THE DESIGN OF SPECIFIC EPOXYSUCCINYL INHIBITORS
  • 1gmy: CATHEPSIN B COMPLEXED WITH DIPEPTIDYL NITRILE INHIBITOR
    1gmy: CATHEPSIN B COMPLEXED WITH DIPEPTIDYL NITRILE INHIBITOR
  • 1huc: THE REFINED 2.15 ANGSTROMS X-RAY CRYSTAL STRUCTURE OF HUMAN LIVER CATHEPSIN B: THE STRUCTURAL BASIS FOR ITS SPECIFICITY
    1huc: THE REFINED 2.15 ANGSTROMS X-RAY CRYSTAL STRUCTURE OF HUMAN LIVER CATHEPSIN B: THE STRUCTURAL BASIS FOR ITS SPECIFICITY
  • 1pbh: CRYSTAL STRUCTURE OF HUMAN RECOMBINANT PROCATHEPSIN B AT 3.2 ANGSTROM RESOLUTION
    1pbh: CRYSTAL STRUCTURE OF HUMAN RECOMBINANT PROCATHEPSIN B AT 3.2 ANGSTROM RESOLUTION
  • 1sp4: Crystal structure of NS-134 in complex with bovine cathepsin B: a two headed epoxysuccinyl inhibitor extends along the whole active site cleft
    1sp4: Crystal structure of NS-134 in complex with bovine cathepsin B: a two headed epoxysuccinyl inhibitor extends along the whole active site cleft
  • 2ipp: Crystal Structure of the tetragonal form of human liver cathepsin B
    2ipp: Crystal Structure of the tetragonal form of human liver cathepsin B
  • 2pbh: CRYSTAL STRUCTURE OF HUMAN PROCATHEPSIN B AT 3.3 ANGSTROM RESOLUTION
    2pbh: CRYSTAL STRUCTURE OF HUMAN PROCATHEPSIN B AT 3.3 ANGSTROM RESOLUTION
  • 3pbh: REFINED CRYSTAL STRUCTURE OF HUMAN PROCATHEPSIN B AT 2.5 ANGSTROM RESOLUTION
    3pbh: REFINED CRYSTAL STRUCTURE OF HUMAN PROCATHEPSIN B AT 2.5 ANGSTROM RESOLUTION
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