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CEBPG

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens

CEBPG
Identifiers
AliasesCEBPG, GPE1BP, IG/EBP-1, CCAAT/enhancer binding protein gamma, CCAAT enhancer binding protein gamma
External IDsOMIM:138972;MGI:104982;HomoloGene:1368;GeneCards:CEBPG;OMA:CEBPG - orthologs
Gene location (Human)
Chromosome 19 (human)
Chr.Chromosome 19 (human)[1]
Chromosome 19 (human)
Genomic location for CEBPG
Genomic location for CEBPG
Band19q13.11Start33,373,685bp[1]
End33,382,686bp[1]
Gene location (Mouse)
Chromosome 7 (mouse)
Chr.Chromosome 7 (mouse)[2]
Chromosome 7 (mouse)
Genomic location for CEBPG
Genomic location for CEBPG
Band7|7 B2Start34,745,847bp[2]
End34,755,998bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • secondary oocyte

  • mucosa of colon

  • mucosa of sigmoid colon

  • muscle of thigh

  • middle temporal gyrus

  • mucosa of transverse colon

  • body of tongue

  • gingival epithelium

  • jejunum

  • jejunal mucosa
Top expressed in
  • olfactory epithelium

  • condyle

  • parotid gland

  • zygote

  • conjunctival fornix

  • lacrimal gland

  • secondary oocyte

  • seminal vesicula

  • fossa

  • left colon
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

1054

12611

Ensembl

ENSG00000153879

ENSMUSG00000056216

UniProt

P53567

P53568

RefSeq (mRNA)

NM_001806
NM_001252296

NM_009884

RefSeq (protein)

NP_001239225
NP_001797

NP_034014

Location (UCSC)Chr 19: 33.37 – 33.38 MbChr 7: 34.75 – 34.76 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

CCAAT/enhancer-binding protein gamma (C/EBPγ) is aprotein that in humans is encoded by theCEBPGgene.[5][6] This gene has nointrons.

TheC/EBP family of transcription factors regulates viral and cellular CCAAT/enhancer element-mediated transcription. C/EBP proteins contain thebZIP region, which is characterized by two motifs in the C-terminal half of the protein: a basic region involved in DNA binding and aleucine zipper motif involved in dimerization. The C/EBP family consist of several related proteins,C/EBPα,C/EBPβ, C/EBPγ,C/EBPδ,C/EBPζ, andC/EBPε, that form homodimers and that form heterodimers with each other. CCAAT/enhancer binding protein gamma may cooperate withFos to bind the positive regulatory element-I (PRE-I) enhancer elements.[6][7]

C/EBPγ forms heterodimer withATF4 for transcriptional activation of target genes inautophagy specifically toamino acid starvation.[8]

C/EBPγ along with its regulator, the trauma-induced transcription factorEGR1, plays an important role in the development ofchronic pain andmechanical hypersensitivity after some types ofinjury orsurgery.[9]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000153879Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000056216Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Williams SC, Cantwell CA, Johnson PF (September 1991)."A family of C/EBP-related proteins capable of forming covalently linked leucine zipper dimers in vitro".Genes & Development.5 (9):1553–1567.doi:10.1101/gad.5.9.1553.PMID 1884998.
  6. ^ab"Entrez Gene: CEBPG CCAAT/enhancer binding protein (C/EBP), gamma".
  7. ^Davydov IV, Bohmann D, Krammer PH, Li-Weber M (August 1995). "Cloning of the cDNA encoding human C/EBP gamma, a protein binding to the PRE-I enhancer element of the human interleukin-4 promoter".Gene.161 (2):271–275.doi:10.1016/0378-1119(95)00271-7.PMID 7665092.
  8. ^Kim D, Kim J, Yu YS, Kim YR, Baek SH, Won KJ (July 2022)."Systemic approaches using single cell transcriptome reveal that C/EBPγ regulates autophagy under amino acid starved condition".Nucleic Acids Research.50 (13):7298–7309.doi:10.1093/nar/gkac593.PMC 9303372.PMID 35801910.
  9. ^Mamet J, Klukinov M, Yaksh TL, Malkmus SA, Williams S, Harris S, et al. (February 2014)."Single intrathecal administration of the transcription factor decoy AYX1 prevents acute and chronic pain after incisional, inflammatory, or neuropathic injury".Pain.155 (2):322–333.doi:10.1016/j.pain.2013.10.015.PMID 24145208.S2CID 29286007.

Further reading

[edit]

External links

[edit]

This article incorporates text from theUnited States National Library of Medicine, which is in thepublic domain.


(1) Basic domains
(1.1) Basicleucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3)bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2)Zinc finger DNA-binding domains
(2.1)Nuclear receptor(Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3.1)Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3)Fork head /winged helix
(3.4)Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4)β-Scaffold factors with minor groove contacts
(4.1)Rel homology region
(4.2)STAT
(4.3) p53-like
(4.4)MADS box
(4.6)TATA-binding proteins
(4.7)High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3)Pocket domain
(0.5)AP-2/EREBP-related factors
(0.6) Miscellaneous
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