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CDH15

From Wikipedia, the free encyclopedia
Protein-coding gene in humans
CDH15
Identifiers
AliasesCDH15, CDH14, CDH3, CDHM, MCAD, MRD3, cadherin 15
External IDsOMIM:114019;MGI:106672;HomoloGene:3622;GeneCards:CDH15;OMA:CDH15 - orthologs
Gene location (Human)
Chromosome 16 (human)
Chr.Chromosome 16 (human)[1]
Chromosome 16 (human)
Genomic location for CDH15
Genomic location for CDH15
Band16q24.3Start89,171,748bp[1]
End89,195,492bp[1]
Gene location (Mouse)
Chromosome 8 (mouse)
Chr.Chromosome 8 (mouse)[2]
Chromosome 8 (mouse)
Genomic location for CDH15
Genomic location for CDH15
Band8 E1|8 71.99 cMStart123,574,705bp[2]
End123,594,136bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • cerebellar hemisphere

  • right hemisphere of cerebellum

  • gastrocnemius muscle

  • muscle of thigh

  • Skeletal muscle tissue of rectus abdominis

  • glutes

  • tibialis anterior muscle

  • deltoid muscle

  • paraflocculus of cerebellum

  • tibia
Top expressed in
  • myotome

  • muscle of thigh

  • lumbar spinal ganglion

  • temporal muscle

  • triceps brachii muscle

  • vastus lateralis muscle

  • body of femur

  • ankle

  • internal carotid artery

  • sternocleidomastoid muscle
More reference expression data
BioGPS


More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

1013

12555

Ensembl

ENSG00000129910

ENSMUSG00000031962

UniProt

P55291

P33146

RefSeq (mRNA)

NM_004933

NM_007662

RefSeq (protein)

NP_004924

NP_031688

Location (UCSC)Chr 16: 89.17 – 89.2 MbChr 8: 123.57 – 123.59 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Cadherin-15 is aprotein that in humans is encoded by theCDH15gene.[5][6]

Function

[edit]

This gene is a member of thecadherin superfamily of genes, encoding calcium-dependent intercellular adhesionglycoproteins. Cadherins consist of an extracellular domain containing 5 cadherin domains, a transmembrane region, and a conserved cytoplasmic domain. Transcripts from this particular cadherin are expressed inmyoblasts and upregulated inmyotubule-forming cells. The protein is thought to be essential for the control ofmorphogenetic processes, specificallymyogenesis, and may provide a trigger for terminal muscle cell differentiation.[6]

Interactions

[edit]

CDH15 has been shown tointeract withARVCF.[7]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000129910Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000031962Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Kaupmann K, Becker-Follmann J, Scherer G, Jockusch H, Starzinski-Powitz A (December 1992). "The gene for the cell adhesion molecule M-cadherin maps to mouse chromosome 8 and human chromosome 16q24.1-qter and is near the E-cadherin (uvomorulin) locus in both species".Genomics.14 (2):488–90.doi:10.1016/S0888-7543(05)80247-2.PMID 1427864.
  6. ^ab"Entrez Gene: CDH15 cadherin 15, M-cadherin (myotubule)".
  7. ^Kaufmann U, Zuppinger C, Waibler Z, Rudiger M, Urbich C, Martin B, Jockusch BM, Eppenberger H, Starzinski-Powitz A (November 2000). "The armadillo repeat region targets ARVCF to cadherin-based cellular junctions".J. Cell Sci.113 (22):4121–35.doi:10.1242/jcs.113.22.4121.PMID 11058098.

Further reading

[edit]

External links

[edit]
Calcium-independent
IgSF CAM
Integrins
Calcium-dependent
Cadherins
Classical
Desmosomal
Protocadherin
Unconventional/ungrouped
Selectins
Other


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