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Integrin alpha X

From Wikipedia, the free encyclopedia
(Redirected fromCD11c)

Mammalian protein found in Homo sapiens
ITGAX
Available structures
PDBOrtholog search:PDBeRCSB
List of PDB id codes

1N3Y,2LUV,3K6S,3K71,3K72,4NEH,4NEN,5ES4

Identifiers
AliasesITGAX, CD11C, SLEB6, integrin subunit alpha X
External IDsOMIM:151510;MGI:96609;HomoloGene:55493;GeneCards:ITGAX;OMA:ITGAX - orthologs
Gene location (Human)
Chromosome 16 (human)
Chr.Chromosome 16 (human)[1]
Chromosome 16 (human)
Genomic location for ITGAX
Genomic location for ITGAX
Band16p11.2Start31,355,134bp[1]
End31,382,999bp[1]
Gene location (Mouse)
Chromosome 7 (mouse)
Chr.Chromosome 7 (mouse)[2]
Chromosome 7 (mouse)
Genomic location for ITGAX
Genomic location for ITGAX
Band7|7 F3Start127,728,719bp[2]
End127,749,829bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • granulocyte

  • monocyte

  • blood

  • upper lobe of left lung

  • spleen

  • right lung

  • appendix

  • C1 segment

  • gallbladder

  • bone marrow cells
Top expressed in
  • spleen

  • right lung lobe

  • granulocyte

  • mesenteric lymph nodes

  • blastocyst

  • blood

  • lactiferous gland

  • jejunum

  • thymus

  • subcutaneous adipose tissue
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

3687

16411

Ensembl

ENSG00000140678

ENSMUSG00000030789

UniProt

P20702

Q9QXH4

RefSeq (mRNA)

NM_000887
NM_001286375

NM_021334
NM_001363984
NM_001363985

RefSeq (protein)

NP_000878
NP_001273304

NP_067309
NP_001350913
NP_001350914

Location (UCSC)Chr 16: 31.36 – 31.38 MbChr 7: 127.73 – 127.75 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

CD11c, also known asIntegrin, alpha X (complement component 3 receptor 4 subunit) (ITGAX), is agene that encodes for CD11c .[5][6]

CD11c is an integrin alpha X chain protein. Integrins are heterodimeric integral membrane proteins composed of an alpha chain and a beta chain. This protein combines with the beta 2 chain (ITGB2) to form a leukocyte-specific integrin referred to as inactivated-C3b (iC3b) receptor 4 (CR4). The alpha X beta 2 complex seems to overlap the properties of thealpha M beta 2 integrin in the adherence of neutrophils and monocytes to stimulated endothelium cells, and in the phagocytosis of complement coated particles.[5]

CD11c is atype I transmembrane protein found at high levels on mosthumandendritic cells, but also onmonocytes,macrophages,neutrophils, and someB cells that induces cellular activation and helps triggerneutrophil respiratory burst; expressed inhairy cell leukemias,acute nonlymphocytic leukemias, and someB-cell chronic lymphocytic leukemias.

See also

[edit]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000140678Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000030789Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ab"Entrez Gene: ITGAX integrin, alpha X (complement component 3 receptor 4 subunit)".
  6. ^Dyer KD, Garcia-Crespo KE, Killoran KE, Rosenberg HF (2011)."Antigen profiles for the quantitative assessment of eosinophils in mouse tissues by flow cytometry".Journal of Immunological Methods.369 (1–2):91–7.doi:10.1016/j.jim.2011.04.009.PMC 3116057.PMID 21565196.

Further reading

[edit]
PDB gallery
  • 1n3y: Crystal structure of the alpha-X beta2 integrin I domain
    1n3y: Crystal structure of the alpha-X beta2 integrin I domain

External links

[edit]

This article incorporates text from theUnited States National Library of Medicine, which is in thepublic domain.

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