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C-C motif chemokine ligand 27

From Wikipedia, the free encyclopedia
(Redirected fromCCL27)
Mammalian protein found in Homo sapiens
CCL27
Available structures
PDBOrtholog search:PDBeRCSB
List of PDB id codes

2KUM

Identifiers
AliasesCCL27, ALP, CTACK, CTAK, ESKINE, ILC, PESKY, SCYA27, C-C motif chemokine ligand 27
External IDsOMIM:604833;MGI:1891389;HomoloGene:104838;GeneCards:CCL27;OMA:CCL27 - orthologs
Gene location (Human)
Chromosome 9 (human)
Chr.Chromosome 9 (human)[1]
Chromosome 9 (human)
Genomic location for CCL27
Genomic location for CCL27
Band9p13.3Start34,661,880bp[1]
End34,664,048bp[1]
Gene location (Mouse)
Chromosome 4 (mouse)
Chr.Chromosome 4 (mouse)[2]
Chromosome 4 (mouse)
Genomic location for CCL27
Genomic location for CCL27
Band4 A5|4Start42,655,251bp[2]
End42,656,005bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • skin of abdomen

  • skin of leg

  • testicle

  • gonad

  • stromal cell of endometrium

  • ganglionic eminence

  • ventricular zone

  • primary visual cortex

  • left testis

  • skeletal muscle tissue
Top expressed in
  • zone of skin

  • pelvic ganglion

  • lip

  • placenta

  • spermatocyte

  • urethra

  • female urethra

  • adrenal gland

  • male urethra

  • thymus
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

10850

100040048

Ensembl

ENSG00000213927

ENSMUSG00000096826

UniProt

Q9Y4X3

Q9Z1X0

RefSeq (mRNA)

NM_006664

NM_001199959
NM_001199960
NM_001199961

RefSeq (protein)

NP_006655

NP_001041644
NP_001157516
NP_001157517
NP_001333994
NP_001348175

NP_035466

Location (UCSC)Chr 9: 34.66 – 34.66 MbChr 4: 42.66 – 42.66 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse
chemokine (C-C motif) ligand 27
Identifiers
SymbolCCL27
Alt. symbolsSCYA27, ALP, ILC, CTACK, skinkine, ESkine, PESKY, CTAK
NCBI gene10850
HGNC10626
OMIM604833
RefSeqNM_006664
UniProtQ9Y4X3
Other data
LocusChr. 9q13
Search for
StructuresSwiss-model
DomainsInterPro

C-C motif chemokine ligand 27 is aprotein that in humans is encoded by the CCL27gene.[5]

Function

[edit]

This gene is one of several CCcytokine genes clustered on thep-arm ofchromosome 9. Cytokines are a family of secreted proteins involved in immunoregulatory andinflammatory processes. The CC cytokines are proteins characterized by two adjacentcysteines. The protein encoded by this gene ischemotactic for skin-associatedmemory T lymphocytes. CCL27 is associated with homing of memoryT lymphocytes to theskin, and plays a role in T cell-mediatedinflammation of the skin.[6][7] CCL27 is expressed in numerous tissues, includinggonads,thymus,placenta andskin. It elicits itschemotactic effects by binding to the chemokine receptorCCR10.[8] The gene for CCL27 is located on humanchromosome 9.[9] Studies of a similarmurine protein indicate that these protein-receptor interactions have a pivotal role inT cell-mediatedskin inflammation. [provided by RefSeq, Sep 2014].

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000213927Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000096826Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^"Entrez Gene: C-C motif chemokine ligand 27". Retrieved2018-03-23.
  6. ^Morales et al. CTACK, a skin-associated chemokine that preferentially attracts skin-homing memory T cells. Proc. Natl. Acad. Sci. U.S.A. 96:14470-14475, 1999.
  7. ^Homey B, Alenius H, Müller A, Soto H, Bowman EP, Yuan W, et al. (February 2002). "CCL27-CCR10 interactions regulate T cell-mediated skin inflammation".Nature Medicine.8 (2):157–65.doi:10.1038/nm0202-157.PMID 11821900.S2CID 35433583.
  8. ^Homey B, Wang W, Soto H, Buchanan ME, Wiesenborn A, Catron D, et al. (April 2000)."Cutting edge: the orphan chemokine receptor G protein-coupled receptor-2 (GPR-2, CCR10) binds the skin-associated chemokine CCL27 (CTACK/ALP/ILC)".Journal of Immunology.164 (7):3465–70.doi:10.4049/jimmunol.164.7.3465.PMID 10725697.
  9. ^Ishikawa-Mochizuki I, Kitaura M, Baba M, Nakayama T, Izawa D, Imai T, et al. (November 1999). "Molecular cloning of a novel CC chemokine, interleukin-11 receptor alpha-locus chemokine (ILC), which is located on chromosome 9p13 and a potential homologue of a CC chemokine encoded by molluscum contagiosum virus".FEBS Letters.460 (3):544–8.Bibcode:1999FEBSL.460..544I.doi:10.1016/s0014-5793(99)01406-4.PMID 10556532.S2CID 39019419.

Further reading

[edit]

This article incorporates text from theUnited States National Library of Medicine, which is in thepublic domain.

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