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CALHM1

From Wikipedia, the free encyclopedia
Protein-coding gene in humans
CALHM1
Identifiers
AliasesCALHM1, FAM26C, calcium homeostasis modulator 1
External IDsOMIM:612234;MGI:3643383;HomoloGene:55508;GeneCards:CALHM1;OMA:CALHM1 - orthologs
Gene location (Human)
Chromosome 10 (human)
Chr.Chromosome 10 (human)[1]
Chromosome 10 (human)
Genomic location for CALHM1
Genomic location for CALHM1
Band10q24.33Start103,453,240bp[1]
End103,458,900bp[1]
Gene location (Mouse)
Chromosome 19 (mouse)
Chr.Chromosome 19 (mouse)[2]
Chromosome 19 (mouse)
Genomic location for CALHM1
Genomic location for CALHM1
Band19|19 C3Start47,129,348bp[2]
End47,132,693bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • endothelial cell

  • prefrontal cortex

  • external globus pallidus

  • pars compacta

  • superior vestibular nucleus

  • Brodmann area 9

  • right frontal lobe

  • Occipital Lobe

  • Brodmann area 23

  • superior frontal gyrus
    n/a
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

255022

546729

Ensembl

ENSG00000185933

ENSMUSG00000079258

UniProt

Q8IU99

D3Z291

RefSeq (mRNA)

NM_001001412

NM_001081271

RefSeq (protein)

NP_001001412

NP_001074740

Location (UCSC)Chr 10: 103.45 – 103.46 MbChr 19: 47.13 – 47.13 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Calcium homeostasis modulator 1 (CALHM1) is a pore-forming subunit of avoltage-gated ion channel and a voltage-gated ATP channel that in humans is encoded by theCALHM1gene.[5][6]

Function

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Central nervous system

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CALHM1 was identified by a tissue-specific gene expression profiling approach[7] that screened for genes located on susceptibility loci for late-onsetAlzheimer's disease (AD) and that are preferentially expressed in the hippocampus,[5] a brain region affected early in AD. CALHM1 is a plasma membrane calcium-permeableion channel regulated by voltage and extracellular calcium levels.[8] The exact function of CALHM1 in the brain is not completely understood, but studies have shown that CALHM1 controls neuronal intracellular calcium homeostasis and signaling, as well as calcium-dependent neuronal excitability and memory in mouse models.[8][9][10] Recent data have also shown that CALHM1 might facilitate theproteolytic degradation of the cerebralamyloid beta peptide, a culprit in ADpathogenesis.[11]

Peripheral taste system

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CALHM1 is expressed intaste bud cells where it controlspurinergic receptor-mediated taste transduction in thegustatory system.[12][13]

See also

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References

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  1. ^abcGRCh38: Ensembl release 89: ENSG00000185933Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000079258Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^abDreses-Werringloer U, Lambert JC, Vingtdeux V, Zhao H, Vais H, Siebert A, Jain A, Koppel J, Rovelet-Lecrux A, Hannequin D, Pasquier F, Galimberti D, Scarpini E, Mann D, Lendon C, Campion D, Amouyel P, Davies P, Foskett JK, Campagne F, Marambaud P (Jun 2008)."A polymorphism in CALHM1 influences Ca2+ homeostasis, Abeta levels, and Alzheimer's disease risk".Cell.133 (7):1149–61.doi:10.1016/j.cell.2008.05.048.PMC 2577842.PMID 18585350.
  6. ^Taruno A, Matsumoto I, Ma Z, Marambaud P, Foskett JK (December 2013)."How do taste cells lacking synapses mediate neurotransmission? CALHM1, a voltage-gated ATP channel".BioEssays: News and Reviews in Molecular, Cellular and Developmental Biology.35 (12):1111–8.doi:10.1002/bies.201300077.PMC 3981604.PMID 24105910.
  7. ^Skrabanek L, Campagne F (Nov 2001)."TissueInfo: high-throughput identification of tissue expression profiles and specificity".Nucleic Acids Research.29 (21): E102-2.doi:10.1093/nar/29.21.e102.PMC 60201.PMID 11691939.
  8. ^abMa Z, Siebert AP, Cheung KH, Lee RJ, Johnson B, Cohen AS, Vingtdeux V, Marambaud P, Foskett JK (Jul 2012)."Calcium homeostasis modulator 1 (CALHM1) is the pore-forming subunit of an ion channel that mediates extracellular Ca2+ regulation of neuronal excitability".Proceedings of the National Academy of Sciences of the United States of America.109 (28): E1963-71.Bibcode:2012PNAS..109E1963M.doi:10.1073/pnas.1204023109.PMC 3396471.PMID 22711817.
  9. ^Dreses-Werringloer U, Vingtdeux V, Zhao H, Chandakkar P, Davies P, Marambaud P (Mar 2013)."CALHM1 controls the Ca²⁺-dependent MEK, ERK, RSK and MSK signaling cascade in neurons".J Cell Sci.126 (Pt 5):1199–206.doi:10.1242/jcs.117135.PMC 4481642.PMID 23345406.
  10. ^Vingtdeux V, Chang EH, Frattini SA, Zhao H, Chandakkar P, Adrien L, Strohl JJ, Gibson EL, Ohmoto M, Matsumoto I, Huerta PT, Marambaud P (Apr 2016)."CALHM1 deficiency impairs cerebral neuron activity and memory flexibility in mice".Sci Rep.6 (24250): 24250.Bibcode:2016NatSR...624250V.doi:10.1038/srep24250.PMC 4828655.PMID 27066908.
  11. ^Vingtdeux V, Chandakkar P, Zhao H, Blanc L, Ruiz S, Marambaud P (May 2015)."CALHM1 ion channel elicits amyloid-β clearance by insulin-degrading enzyme in cell lines and in vivo in the mouse brain".J Cell Sci.128 (13):2330–8.doi:10.1242/jcs.167270.PMC 4524106.PMID 25999473.
  12. ^Taruno A, Vingtdeux V, Ohmoto M, Ma Z, Dvoryanchikov G, Li A, Adrien L, Zhao H, Leung S, Abernethy M, Koppel J, Davies P, Civan MM, Chaudhari N, Matsumoto I, Hellekant G, Tordoff MG, Marambaud P, Foskett JK (Mar 2013)."CALHM1 ion channel mediates purinergic neurotransmission of sweet, bitter and umami tastes".Nature.495 (7440):223–6.Bibcode:2013Natur.495..223T.doi:10.1038/nature11906.PMC 3600154.PMID 23467090.
  13. ^Kinnamon SC, Finger TE (Dec 2013)."A taste for ATP: neurotransmission in taste buds".Front Cell Neurosci.7: 264.doi:10.3389/fncel.2013.00264.PMC 3866518.PMID 24385952.

External links

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Further reading

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