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Bacteroidales

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(Redirected fromBacteroidia)
Order of bacteria

Bacteroidales
"Bacteroides biacutis" anaerobically cultured in blood agar medium
Bacteroides biacutisanaerobically cultured inblood agar medium
Scientific classificationEdit this classification
Domain:Bacteria
Kingdom:Pseudomonadati
Phylum:Bacteroidota
Class:Bacteroidia
Krieg 2012[2]
Order:Bacteroidales
Krieg 2012[1]
Families[3][4][5]
Synonyms
  • Bacteroidia:
    • "Bacteroidetia"Cavalier-Smith 2020
  • Bacteroidales:
    • MarinilabilialesWu et al. 2016

Bacteroidales is anorder ofbacteria.[1][3] Notably it includes the generaPrevotella andBacteroides , which are commonly found in thehuman gut microbiota.

Phylogeny

[edit]

The currently accepted taxonomy is based on theList of Prokaryotic names with Standing in Nomenclature[3] andNational Center for Biotechnology Information (NCBI).[4]

Whole-genome based phylogeny[6]16S rRNA basedLTP_12_2021[7][8][9]GTDB 07-RS207 byGenome Taxonomy Database[10][11][12]

P3

"Ca.Limimorpha"Gilroy et al. 2021

LentimicrobiaceaeSun et al. 2016

"Bacteroides periocalifornicus"

TenuifilaceaePodosokorskaya et al. 2021

WilliamwhitmaniaceaePikuta et al. 2017

UBA932

AcetobacteroidesSu et al. 2014

RikenellaceaeKrieg et al. 2012

SalinivirgaceaeBen Hania et al. 2017

ProlixibacteraceaeHuang et al. 2014 (incl.Draconibacteriaceae)

MarinifilaceaeIino et al. 2014 (incl.Balneicellaceae;Odoribacteraceae)

MarinilabiliaceaeLudwig et al. 2012

PaludibacteraceaeOrmerod et al. 2022[13]

PorphyromonadaceaeKrieg 2012

TannerellaceaeOrmerod et al. 2022

"Azobacteroidaceae"

DysgonomonadaceaeGarcía-López et al. 2020

"Ca.Gallibacteroides"Gilroy et al. 2021

"Coprobacteraceae"

"Ca.Caccoplasma"Gilroy et al. 2021

BarnesiellaceaeGarcía-López et al. 2020

MuribaculaceaeLagkouvardos et al. 2019 (incl. "Homeothermaceae")

BacteroidaceaePribram 1933 (incl.Prevotellaceae)

Notes

[edit]

References

[edit]
  1. ^abKrieg NR (2010). "Order I.Bacteroidales ord. nov.". In Krieg NR, Staley JT, Brown DR, Hedlund BP, Paster BJ, Ward NL, Ludwig W, Whitman WB (eds.).Bergey's Manual of Systematic Bacteriology. Vol. 4 (2nd ed.). New York, NY: Springer. p. 25.
  2. ^Krieg NR (2010). "Class I.Bacteroidia class. nov.". In Krieg NR, Staley JT, Brown DR, Hedlund BP, Paster BJ, Ward NL, Ludwig W, Whitman WB (eds.).Bergey's Manual of Systematic Bacteriology. Vol. 4 (2nd ed.). New York, NY: Springer. p. 25.
  3. ^abcEuzéby JP, Parte AC."Bacteroidia".List of Prokaryotic names with Standing in Nomenclature (LPSN). RetrievedJune 25, 2021.
  4. ^abSayers; et al."Bacteroidia".National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved2016-03-20.
  5. ^Parker, Charles Thomas; Garrity, George M (19 October 2017). Parker, Charles Thomas; Garrity, George M (eds.)."Williamwhitmaniaceae Pikuta et al. 2017 emend. García-López et al. 2019".NamesforLife.doi:10.1601/tx.30875.
  6. ^García-López M, Meier-Kolthoff JP, Tindall BJ, Gronow S, Woyke T, Kyrpides NC, Hahnke RL, Göker M (2019)."Analysis of 1,000 Type-Strain Genomes Improves Taxonomic Classification ofBacteroidetes".Front Microbiol.10: 2083.doi:10.3389/fmicb.2019.02083.PMC 6767994.PMID 31608019.
  7. ^"The LTP". Retrieved23 February 2021.
  8. ^"LTP_all tree in newick format". Retrieved23 February 2021.
  9. ^"LTP_12_2021 Release Notes"(PDF). Retrieved23 February 2021.
  10. ^"GTDB release 07-RS207".Genome Taxonomy Database. Retrieved20 June 2022.
  11. ^"ar53_r207.sp_label".Genome Taxonomy Database. Retrieved20 June 2022.
  12. ^"Taxon History".Genome Taxonomy Database. Retrieved20 June 2022.
  13. ^Ormerod, Kate L.; Wood, David L. A.; Lachner, Nancy; Gellatly, Shaan L.; Daly, Joshua N.; Parsons, Jeremy D.; Dal'Molin, Cristiana G. O.; Palfreyman, Robin W.; Nielsen, Lars K.; Cooper, Matthew A.; Morrison, Mark; Hansbro, Philip M.; Hugenholtz, Philip (7 July 2016)."Genomic characterization of the unculturedBacteroidales family S24-7 inhabiting the guts of homeothermic animals".Microbiome.4 (1): 36.doi:10.1186/s40168-016-0181-2.PMC 4936053.PMID 27388460.
Prokaryotes:Bacteria classification
Terrabacteria
BV1, BV3, BV5
others
Cyanoprokaryota
Firmicutes
BV3
Low GC
  • Bacillota
  • Bacillota A
    • "Clostridiia"
    • "Thermoanaerobacteria"
    • Thermosediminibacteria
  • Bacillota D
  • Bacillota E
    • Sulfobacillia
    • Symbiobacteriia
    • Thermaerobacteria
  • Bacillota G
    • "Hydrogenisporia"
    • Limnochordia
  • "Desulfotomaculota"
    • "Carboxydocellia"
    • "Carboxydothermia"
    • "Dehalobacteriia"
    • Desulfitobacteriia
    • Desulfotomaculia
    • "Moorellia"
    • Peptococcia
    • Syntrophomonadia
    • Thermincolia
  • "Halanaerobiaeota"
  • "Selenobacteria"
CPR group
Thermotogida
Synergistetes
Thermocalda
Fusobacterida
Hydrobacteria
BV2, BV4
Clade 1
Spirochaeto
bacteriobiontes
PVC group
(Planctobacteria)
FCB group
(Sphingobacteria)
Proteobacteria
BV2
Aquificida
Deltaproteobacteria
others
others
Bacteroidales
Bacteroidia


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