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BAZ1B

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens
BAZ1B
Available structures
PDBOrtholog search:PDBeRCSB
List of PDB id codes

1F62

Identifiers
AliasesBAZ1B, WBSCR10, WBSCR9, WSTF, bromodomain adjacent to zinc finger domain 1B
External IDsOMIM:605681;MGI:1353499;HomoloGene:22651;GeneCards:BAZ1B;OMA:BAZ1B - orthologs
Gene location (Human)
Chromosome 7 (human)
Chr.Chromosome 7 (human)[1]
Chromosome 7 (human)
Genomic location for BAZ1B
Genomic location for BAZ1B
Band7q11.23Start73,440,406bp[1]
End73,522,293bp[1]
Gene location (Mouse)
Chromosome 5 (mouse)
Chr.Chromosome 5 (mouse)[2]
Chromosome 5 (mouse)
Genomic location for BAZ1B
Genomic location for BAZ1B
Band5|5 G2Start135,216,118bp[2]
End135,274,983bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • oocyte

  • secondary oocyte

  • ventricular zone

  • ganglionic eminence

  • sural nerve

  • Achilles tendon

  • cerebellar vermis

  • stromal cell of endometrium

  • islet of Langerhans

  • paraflocculus of cerebellum
Top expressed in
  • Ileal epithelium

  • tail of embryo

  • mandibular prominence

  • maxillary prominence

  • genital tubercle

  • zygote

  • secondary oocyte

  • condyle

  • ventricular zone

  • tibiofemoral joint
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

9031

22385

Ensembl

ENSG00000009954

ENSMUSG00000002748

UniProt

Q9UIG0

Q9Z277

RefSeq (mRNA)

NM_023005
NM_032408
NM_001370402

NM_011714

RefSeq (protein)

NP_115784
NP_001357331

NP_035844

Location (UCSC)Chr 7: 73.44 – 73.52 MbChr 5: 135.22 – 135.27 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Tyrosine-protein kinase, orBromodomain adjacent tozinc finger domain, 1B (BAZ1B) is anenzyme that in humans is encoded by theBAZ1Bgene.[5][6][7]

Function

[edit]

This gene encodes a member of thebromodomain protein family. The bromodomain is a structural motif characteristic of proteins involved inchromatin-dependent regulation of transcription. This gene is deleted inWilliams-Beuren syndrome, adevelopmental disorder caused by deletion of multiple genes at 7q11.23.[7]

BAZ1B has been found to affect the activity of 448 other genes and is very important in the development of theneural crest and theface. Research suggests that changes in BAZ1B may have been involved in "self-domesticating" humans.[8][9]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000009954Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000002748Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Peoples RJ, Cisco MJ, Kaplan P, Francke U (Feb 1999). "Identification of the WBSCR9 gene, encoding a novel transcriptional regulator, in the Williams-Beuren syndrome deletion at 7q11.23".Cytogenetics and Cell Genetics.82 (3–4):238–46.doi:10.1159/000015110.PMID 9858827.S2CID 46824270.
  6. ^Lu X, Meng X, Morris CA, Keating MT (December 1998). "A novel human gene, WSTF, is deleted in Williams syndrome".Genomics.54 (2):241–9.doi:10.1006/geno.1998.5578.PMID 9828126.
  7. ^ab"Entrez Gene: BAZ1B bromodomain adjacent to zinc finger domain, 1B".
  8. ^Zanella M, Vitriolo A, Andirko A, Martins PT, Sturm S, O'Rourke T, et al. (December 2019)."Dosage analysis of the 7q11. 23 Williams region identifies BAZ1B as a major human gene patterning the modern human face and underlying self-domestication".Science Advances.5 (12) eaaw7908.Bibcode:2019SciA....5.7908Z.doi:10.1126/sciadv.aaw7908.PMC 6892627.PMID 31840056.
  9. ^Marshall M (Dec 14, 2019)."A single gene controls how our faces develop when we are young".New Scientist.

Further reading

[edit]

External links

[edit]

This article incorporates text from theUnited States National Library of Medicine, which is in thepublic domain.

PDB gallery
  • 1f62: WSTF-PHD
    1f62: WSTF-PHD
(1) Basic domains
(1.1) Basicleucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3)bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2)Zinc finger DNA-binding domains
(2.1)Nuclear receptor(Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3.1)Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3)Fork head /winged helix
(3.4)Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4)β-Scaffold factors with minor groove contacts
(4.1)Rel homology region
(4.2)STAT
(4.3) p53-like
(4.4)MADS box
(4.6)TATA-binding proteins
(4.7)High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3)Pocket domain
(0.5)AP-2/EREBP-related factors
(0.6) Miscellaneous
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