Movatterモバイル変換


[0]ホーム

URL:


Jump to content
WikipediaThe Free Encyclopedia
Search

BATF (gene)

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens

BATF
Identifiers
AliasesBATF, B-ATF, BATF1, SFA-2, SFA2, basic leucine zipper ATF-like transcription factor
External IDsOMIM:612476;MGI:1859147;HomoloGene:4666;GeneCards:BATF;OMA:BATF - orthologs
Gene location (Human)
Chromosome 14 (human)
Chr.Chromosome 14 (human)[1]
Chromosome 14 (human)
Genomic location for BATF
Genomic location for BATF
Band14q24.3Start75,522,455bp[1]
End75,546,993bp[1]
Gene location (Mouse)
Chromosome 12 (mouse)
Chr.Chromosome 12 (mouse)[2]
Chromosome 12 (mouse)
Genomic location for BATF
Genomic location for BATF
Band12|12 D2Start85,733,443bp[2]
End85,755,861bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • granulocyte

  • blood

  • monocyte

  • spleen

  • lymph node

  • appendix

  • palpebral conjunctiva

  • testicle

  • bone marrow

  • olfactory zone of nasal mucosa
Top expressed in
  • granulocyte

  • embryo

  • spleen

  • embryo

  • lymph node

  • blood

  • mesenteric lymph nodes

  • thymus

  • parotid gland

  • subcutaneous adipose tissue
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

10538

53314

Ensembl

ENSG00000156127

ENSMUSG00000034266

UniProt

Q16520

O35284

RefSeq (mRNA)

NM_006399

NM_016767

RefSeq (protein)

NP_006390

NP_058047

Location (UCSC)Chr 14: 75.52 – 75.55 MbChr 12: 85.73 – 85.76 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Basic leucine zipper transcription factor, ATF-like, also known asBATF, is aprotein which in humans is encoded by theBATFgene.[5][6][7]

Function

[edit]

The protein encoded by this gene is a nuclear basic leucine zipper (bZIP) protein that belongs to theAP-1/ATF superfamily oftranscription factors. The leucine zipper of this protein mediates dimerization with members of theJun family of proteins. This protein is thought to be a negative regulator of AP-1/ATF transcriptional events.[7]

Mice without the BATF gene (BATFknockout mice) lacked a type of inflammatory immune cell (Th17) and were resistant to conditions that normally induces an autoimmune condition similar tomultiple sclerosis.[8]

Interactions

[edit]

BATF (gene) has been shown tointeract withIFI35.[9]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000156127Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000034266Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Dorsey MJ, Tae HJ, Sollenberger KG, Mascarenhas NT, Johansen LM, Taparowsky EJ (December 1995). "B-ATF: a novel human bZIP protein that associates with members of the AP-1 transcription factor family".Oncogene.11 (11):2255–65.PMID 8570175.
  6. ^Hasegawa H, Utsunomiya Y, Kishimoto K, Tange Y, Yasukawa M, Fujita S (May 1996). "SFA-2, a novel bZIP transcription factor induced by human T-cell leukemia virus type I, is highly expressed in mature lymphocytes".Biochem. Biophys. Res. Commun.222 (1):164–70.Bibcode:1996BBRC..222..164H.doi:10.1006/bbrc.1996.0700.PMID 8630063.
  7. ^ab"Entrez Gene: BATF basic leucine zipper transcription factor, ATF-like".
  8. ^Schraml BU, Hildner K, Ise W, Lee WL, Smith WA, Solomon B, Sahota G, Sim J, Mukasa R, Cemerski S, Hatton RD, Stormo GD, Weaver CT, Russell JH, Murphy TL, Murphy KM (July 2009)."The AP-1 transcription factor Batf controls TH17 differentiation".Nature.460 (7253):405–9.Bibcode:2009Natur.460..405S.doi:10.1038/nature08114.PMC 2716014.PMID 19578362.
  9. ^Wang X, Johansen LM, Tae HJ, Taparowsky EJ (1996). "IFP 35 forms complexes with B-ATF, a member of the AP1 family of transcription factors".Biochem. Biophys. Res. Commun.229 (1):316–22.Bibcode:1996BBRC..229..316W.doi:10.1006/bbrc.1996.1799.PMID 8954125.

Further reading

[edit]

External links

[edit]

This article incorporates text from theUnited States National Library of Medicine, which is in thepublic domain.

(1) Basic domains
(1.1) Basicleucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3)bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2)Zinc finger DNA-binding domains
(2.1)Nuclear receptor(Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3.1)Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3)Fork head /winged helix
(3.4)Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4)β-Scaffold factors with minor groove contacts
(4.1)Rel homology region
(4.2)STAT
(4.3) p53-like
(4.4)MADS box
(4.6)TATA-binding proteins
(4.7)High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3)Pocket domain
(0.5)AP-2/EREBP-related factors
(0.6) Miscellaneous
Inhibits
AP-1, BZLF1


Stub icon

This article on agene on humanchromosome 14 is astub. You can help Wikipedia byexpanding it.

Retrieved from "https://en.wikipedia.org/w/index.php?title=BATF_(gene)&oldid=1321972603"
Categories:
Hidden categories:

[8]ページ先頭

©2009-2025 Movatter.jp