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Activating transcription factor 2

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens

ATF2
Available structures
PDBOrtholog search:PDBeRCSB
List of PDB id codes

1BHI,1T2K,4H36

Identifiers
AliasesATF2, CRE-BP1, CREB-2, CREB2, HB16, TREB7, activating transcription factor 2
External IDsOMIM:123811;MGI:109349;HomoloGene:31061;GeneCards:ATF2;OMA:ATF2 - orthologs
Gene location (Human)
Chromosome 2 (human)
Chr.Chromosome 2 (human)[1]
Chromosome 2 (human)
Genomic location for ATF2
Genomic location for ATF2
Band2q31.1Start175,072,250bp[1]
End175,168,382bp[1]
Gene location (Mouse)
Chromosome 2 (mouse)
Chr.Chromosome 2 (mouse)[2]
Chromosome 2 (mouse)
Genomic location for ATF2
Genomic location for ATF2
Band2|2 C3Start73,816,509bp[2]
End73,892,639bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • endothelial cell

  • germinal epithelium

  • Brodmann area 23

  • corpus epididymis

  • caput epididymis

  • mucosa of paranasal sinus

  • pars compacta

  • tail of epididymis

  • ganglionic eminence

  • Epithelium of choroid plexus
Top expressed in
  • paraventricular nucleus of hypothalamus

  • medial dorsal nucleus

  • dorsomedial hypothalamic nucleus

  • habenula

  • arcuate nucleus

  • ventral tegmental area

  • olfactory tubercle

  • lateral septal nucleus

  • anterior amygdaloid area

  • subiculum
More reference expression data
BioGPS


More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

1386

11909

Ensembl

ENSG00000115966

ENSMUSG00000027104

UniProt

P15336

P16951

RefSeq (mRNA)
NM_001256090
NM_001256091
NM_001256092
NM_001256093
NM_001256094

NM_001880

NM_001025093
NM_001284369
NM_001284370
NM_001284371
NM_001284372

NM_001284373
NM_001284374
NM_001284376
NM_009715

RefSeq (protein)
NP_001243019
NP_001243020
NP_001243021
NP_001243022
NP_001243023

NP_001871

NP_001020264
NP_001271298
NP_001271299
NP_001271300
NP_001271301

NP_001271302
NP_001271303
NP_001271305
NP_033845

Location (UCSC)Chr 2: 175.07 – 175.17 MbChr 2: 73.82 – 73.89 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Activating transcription factor 2, also known asATF2, is aprotein that, in humans, is encoded by theATF2gene.[5]

Function

[edit]

This gene encodes atranscription factor that is a member of theleucine zipper family of DNA-binding proteins. This protein binds to thecAMP-responsive element (CRE), an octameric palindrome. The protein forms a homodimer or heterodimer withc-Jun. The protein is also ahistone acetyltransferase (HAT) that specifically acetylates histones H2B and H4 in vitro; thus, it may represent a class of sequence-specific factors that activate transcription by direct effects onchromatin components. Additional transcript variants have been identified but their biological validity has not been determined.[5]

The gene atf2 is located at human chromosome 2q32.[6] The protein ATF-2 has 505 amino acids. Studies in mice indicate a role for ATF-2 in the development of nervous system and the skeleton.[7] ATF-2 is normally activated in response to signals that converge onstress-activated protein kinases p38 andJNK.[8] ATF-2 phosphorylation in response to treatment of cells with tumor promoterphorbol ester has been demonstrated.[9]

Several studies implicate abnormal activation of ATF-2 in growth and progression of mammalian skin tumors.[10][11] ATF-2 may mediate oncogenesis caused by mutantRas protein[12] and regulate maintenance of the aggressive cancer phenotype of some types of epithelial cells.

ATF2 has also been shown to bephosphorylated at itsC-terminal (serine 472 and 480 in mouse; serine 490 and 498 in human) byATM upondouble-stranded breaks.[13] Mice with mutations of these two serines are sensitive to irradiation and easier to tumorigenesis under p53 knockout background.

Interactions

[edit]

Activating transcription factor 2 has been shown tointeract with

See also

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References

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  1. ^abcGRCh38: Ensembl release 89: ENSG00000115966Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000027104Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ab"Entrez Gene: ATF2 activating transcription factor 2".
  6. ^Ozawa K, Sudo T, Soeda E, Yoshida MC, Ishii S (1991). "Assignment of the human CREB2 (CRE-BP1) gene to 2q32".Genomics.10 (4):1103–4.doi:10.1016/0888-7543(91)90210-6.PMID 1833307.
  7. ^Reimold AM, Grusby MJ, Kosaras B, Fries JW, Mori R, Maniwa S, Clauss IM, Collins T, Sidman RL, Glimcher MJ, Glimcher LH (1996). "Chondrodysplasia and neurological abnormalities in ATF-2-deficient mice".Nature.379 (6562):262–5.Bibcode:1996Natur.379..262R.doi:10.1038/379262a0.PMID 8538792.S2CID 4326412.
  8. ^Gupta S, Campbell D, Dérijard B, Davis RJ (1995). "Transcription factor ATF2 regulation by the JNK signal transduction pathway".Science.267 (5196):389–93.Bibcode:1995Sci...267..389G.doi:10.1126/science.7824938.PMID 7824938.S2CID 40268838.
  9. ^Yamasaki T, Takahashi A, Pan J, Yamaguchi N, Yokoyama KK (March 2009)."Phosphorylation of Activation Transcription Factor-2 at Serine 121 by Protein Kinase C Controls c-Jun-mediated Activation of Transcription".J. Biol. Chem.284 (13):8567–81.doi:10.1074/jbc.M808719200.PMC 2659215.PMID 19176525.
  10. ^Leslie MC, Bar-Eli M (2005). "Regulation of gene expression in melanoma: new approaches for treatment".J. Cell. Biochem.94 (1):25–38.doi:10.1002/jcb.20296.PMID 15523674.S2CID 23515325.
  11. ^Papassava P, Gorgoulis VG, Papaevangeliou D, Vlahopoulos S, van Dam H, Zoumpourlis V (2004). "Overexpression of activating transcription factor-2 is required for tumor growth and progression in mouse skin tumors".Cancer Res.64 (23):8573–84.doi:10.1158/0008-5472.CAN-03-0955.PMID 15574764.S2CID 14845890.
  12. ^Vlahopoulos SA, Logotheti S, Mikas D, Giarika A, Gorgoulis V, Zoumpourlis V (17 March 2008). "The role of ATF-2 in oncogenesis".BioEssays.30 (4):314–27.doi:10.1002/bies.20734.PMID 18348191.S2CID 678541.
  13. ^Bhoumik A, Takahashi S, Breitweiser W, Shiloh Y, Jones N, Ronai Z (May 2005)."ATM-dependent phosphorylation of ATF2 is required for the DNA damage response".Mol. Cell.18 (5):577–87.doi:10.1016/j.molcel.2005.04.015.PMC 2954254.PMID 15916964.
  14. ^Newell CL, Deisseroth AB, Lopez-Berestein G (July 1994). "Interaction of nuclear proteins with an AP-1/CRE-like promoter sequence in the human TNF-alpha gene".J. Leukoc. Biol.56 (1):27–35.doi:10.1002/jlb.56.1.27.PMID 8027667.S2CID 85570533.
  15. ^Kara CJ, Liou HC, Ivashkiv LB, Glimcher LH (April 1990)."A cDNA for a human cyclic AMP response element-binding protein which is distinct from CREB and expressed preferentially in brain".Mol. Cell. Biol.10 (4):1347–57.doi:10.1128/MCB.10.4.1347.PMC 362236.PMID 2320002.
  16. ^Hai T, Curran T (May 1991)."Cross-family dimerization of transcription factors Fos/Jun and ATF/CREB alters DNA binding specificity".Proc. Natl. Acad. Sci. U.S.A.88 (9):3720–4.Bibcode:1991PNAS...88.3720H.doi:10.1073/pnas.88.9.3720.PMC 51524.PMID 1827203.
  17. ^abYamaguchi Y, Wada T, Suzuki F, Takagi T, Hasegawa J, Handa H (August 1998)."Casein kinase II interacts with the bZIP domains of several transcription factors".Nucleic Acids Res.26 (16):3854–61.doi:10.1093/nar/26.16.3854.PMC 147779.PMID 9685505.
  18. ^Sano Y, Tokitou F, Dai P, Maekawa T, Yamamoto T, Ishii S (October 1998)."CBP alleviates the intramolecular inhibition of ATF-2 function".J. Biol. Chem.273 (44):29098–105.doi:10.1074/jbc.273.44.29098.PMID 9786917.
  19. ^Murata T, Shinozuka Y, Obata Y, Yokoyama KK (May 2008). "Phosphorylation of two eukaryotic transcription factors, Jun dimerization protein 2 and activation transcription factor 2, in Escherichia coli by Jun N-terminal kinase 1".Anal. Biochem.376 (1):115–21.doi:10.1016/j.ab.2008.01.038.PMID 18307971.
  20. ^abRaingeaud J, Gupta S, Rogers JS, Dickens M, Han J, Ulevitch RJ, Davis RJ (March 1995)."Pro-inflammatory cytokines and environmental stress cause p38 mitogen-activated protein kinase activation by dual phosphorylation on tyrosine and threonine".J. Biol. Chem.270 (13):7420–6.doi:10.1074/jbc.270.13.7420.PMID 7535770.
  21. ^abChen Z, Cobb MH (May 2001)."Regulation of stress-responsive mitogen-activated protein (MAP) kinase pathways by TAO2".J. Biol. Chem.276 (19):16070–5.doi:10.1074/jbc.M100681200.PMID 11279118.
  22. ^abTournier C, Whitmarsh AJ, Cavanagh J, Barrett T, Davis RJ (July 1997)."Mitogen-activated protein kinase kinase 7 is an activator of the c-Jun NH2-terminal kinase".Proc. Natl. Acad. Sci. U.S.A.94 (14):7337–42.Bibcode:1997PNAS...94.7337T.doi:10.1073/pnas.94.14.7337.PMC 23822.PMID 9207092.
  23. ^Fuchs SY, Xie B, Adler V, Fried VA, Davis RJ, Ronai Z (December 1997)."c-Jun NH2-terminal kinases target the ubiquitination of their associated transcription factors".J. Biol. Chem.272 (51):32163–8.doi:10.1074/jbc.272.51.32163.PMID 9405416.
  24. ^Sano Y, Harada J, Tashiro S, Gotoh-Mandeville R, Maekawa T, Ishii S (March 1999)."ATF-2 is a common nuclear target of Smad and TAK1 pathways in transforming growth factor-beta signaling".J. Biol. Chem.274 (13):8949–57.doi:10.1074/jbc.274.13.8949.PMID 10085140.
  25. ^Hong S, Choi HM, Park MJ, Kim YH, Choi YH, Kim HH, Choi YH, Cheong J (April 2004)."Activation and interaction of ATF2 with the coactivator ASC-2 are responsive for granulocytic differentiation by retinoic acid".J. Biol. Chem.279 (17):16996–7003.doi:10.1074/jbc.M311752200.PMID 14734562.
  26. ^Cho SG, Bhoumik A, Broday L, Ivanov V, Rosenstein B, Ronai Z (December 2001)."TIP49b, a regulator of activating transcription factor 2 response to stress and DNA damage".Mol. Cell. Biol.21 (24):8398–413.doi:10.1128/MCB.21.24.8398-8413.2001.PMC 100004.PMID 11713276.
  27. ^Firestein R, Feuerstein N (March 1998)."Association of activating transcription factor 2 (ATF2) with the ubiquitin-conjugating enzyme hUBC9. Implication of the ubiquitin/proteasome pathway in regulation of ATF2 in T cells".J. Biol. Chem.273 (10):5892–902.doi:10.1074/jbc.273.10.5892.PMID 9488727.

External links

[edit]

Further reading

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External links

[edit]
  • PDBe-KB provides an overview of all the structure information available in the PDB for Human Cyclic AMP-dependent transcription factor ATF-2


PDB gallery
  • 1bhi: STRUCTURE OF TRANSACTIVATION DOMAIN OF CRE-BP1/ATF-2, NMR, 20 STRUCTURES
    1bhi: STRUCTURE OF TRANSACTIVATION DOMAIN OF CRE-BP1/ATF-2, NMR, 20 STRUCTURES
  • 1t2k: Structure Of The DNA Binding Domains Of IRF3, ATF-2 and Jun Bound To DNA
    1t2k: Structure Of The DNA Binding Domains Of IRF3, ATF-2 and Jun Bound To DNA
(1) Basic domains
(1.1) Basicleucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3)bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2)Zinc finger DNA-binding domains
(2.1)Nuclear receptor(Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3.1)Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3)Fork head /winged helix
(3.4)Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4)β-Scaffold factors with minor groove contacts
(4.1)Rel homology region
(4.2)STAT
(4.3) p53-like
(4.4)MADS box
(4.6)TATA-binding proteins
(4.7)High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3)Pocket domain
(0.5)AP-2/EREBP-related factors
(0.6) Miscellaneous
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