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ATP6V0D1

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens
ATP6V0D1
Identifiers
AliasesATP6V0D1, ATP6D, ATP6DV, P39, VATX, VMA6, VPATPD, ATPase H+ transporting V0 subunit d1
External IDsOMIM:607028;MGI:1201778;HomoloGene:3444;GeneCards:ATP6V0D1;OMA:ATP6V0D1 - orthologs
Gene location (Human)
Chromosome 16 (human)
Chr.Chromosome 16 (human)[1]
Chromosome 16 (human)
Genomic location for ATP6V0D1
Genomic location for ATP6V0D1
Band16q22.1Start67,438,014bp[1]
End67,481,181bp[1]
Gene location (Mouse)
Chromosome 8 (mouse)
Chr.Chromosome 8 (mouse)[2]
Chromosome 8 (mouse)
Genomic location for ATP6V0D1
Genomic location for ATP6V0D1
Band8|8 D3Start106,251,097bp[2]
End106,292,679bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • mucosa of transverse colon

  • beta cell

  • lateral nuclear group of thalamus

  • granulocyte

  • mononuclear cell

  • monocyte

  • pars compacta

  • prefrontal cortex

  • right frontal lobe

  • lower lobe of lung
Top expressed in
  • facial motor nucleus

  • anterior horn of spinal cord

  • stroma of bone marrow

  • hippocampus proper

  • superior frontal gyrus

  • epithelium of lens

  • central gray substance of midbrain

  • subiculum

  • Temporal Lobe

  • primary motor cortex
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

9114

11972

Ensembl

ENSG00000159720

ENSMUSG00000013160

UniProt

P61421

P51863

RefSeq (mRNA)

NM_004691

NM_013477

RefSeq (protein)

NP_004682

NP_038505

Location (UCSC)Chr 16: 67.44 – 67.48 MbChr 8: 106.25 – 106.29 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

V-type proton ATPase subunit d 1 is anenzyme that in humans is encoded by theATP6V0D1gene.[5][6]

This gene encodes a component of vacuolar ATPase (V-ATPase), a multisubunit enzyme that mediates acidification of eukaryotic intracellular organelles. V-ATPase dependent organelle acidification is necessary for such intracellular processes as protein sorting, zymogen activation, receptor-mediated endocytosis, and synaptic vesicle proton gradient generation. V-ATPase is composed of a cytosolic V1 domain and a transmembrane V0 domain. The V1 domain consists of three A and three B subunits, two G subunits plus the C, D, E, F, and H subunits. The V1 domain contains the ATP catalytic site. The V0 domain consists of five different subunits: a, c, c', c'', and d. Additional isoforms of many of the V1 and V0 subunit proteins are encoded by multiple genes or alternatively spliced transcript variants. This encoded protein is known as the D subunit and is found ubiquitously.[6]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000159720Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000013160Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^van Hille B, Vanek M, Richener H, Green JR, Bilbe G (Jan 1994). "Cloning and tissue distribution of subunits C, D, and E of the human vacuolar H(+)-ATPase".Biochem Biophys Res Commun.197 (1):15–21.doi:10.1006/bbrc.1993.2434.PMID 8250920.
  6. ^ab"Entrez Gene: ATP6V0D1 ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1".

External links

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Further reading

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