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ATP6AP1

From Wikipedia, the free encyclopedia

Protein-coding gene in humans
ATP6AP1
Identifiers
AliasesATP6AP1, 16A, ATP6IP1, ATP6S1, Ac45, CF2, VATPS1, XAP-3, XAP3, ATPase H+ transporting accessory protein 1
External IDsOMIM:300197;MGI:109629;HomoloGene:914;GeneCards:ATP6AP1;OMA:ATP6AP1 - orthologs
Gene location (Human)
X chromosome (human)
Chr.X chromosome (human)[1]
X chromosome (human)
Genomic location for ATP6AP1
Genomic location for ATP6AP1
BandXq28Start154,428,633bp[1]
End154,436,516bp[1]
Gene location (Mouse)
X chromosome (mouse)
Chr.X chromosome (mouse)[2]
X chromosome (mouse)
Genomic location for ATP6AP1
Genomic location for ATP6AP1
BandX A7.3|X 37.96 cMStart73,340,703bp[2]
End73,348,327bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • Brodmann area 10

  • paraflocculus of cerebellum

  • islet of Langerhans

  • stromal cell of endometrium

  • right hemisphere of cerebellum

  • right frontal lobe

  • anterior pituitary

  • frontal pole

  • middle frontal gyrus

  • cingulate gyrus
Top expressed in
  • stroma of bone marrow

  • dentate gyrus of hippocampal formation granule cell

  • superior frontal gyrus

  • primary visual cortex

  • calvaria

  • granulocyte

  • epithelium of stomach

  • cerebellar cortex

  • anterior horn of spinal cord

  • hippocampus proper
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

537

54411

Ensembl

ENSG00000071553

ENSMUSG00000019087

UniProt

Q15904

Q9R1Q9

RefSeq (mRNA)

NM_001183

NM_018794
NM_001358375
NM_001358380

RefSeq (protein)

NP_001174

NP_061264
NP_001345304
NP_001345309

Location (UCSC)Chr X: 154.43 – 154.44 MbChr X: 73.34 – 73.35 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

The humangeneATP6AP1 encodes the S1 subunit of theenzymeV-type proton ATPase.[5][6][7]

This gene encodes a component of a multisubunit enzyme (1mDa MW) that mediates acidification ofeukaryotic intracellularorganelles. Vacuolar ATPase (V-ATPase) is composed of a cytosolic, V1, (site of the ATP catalytic site) and a transmembrane, V0, domain. V-ATPase dependent organelle acidification is necessary for such intracellular processes as protein sorting,zymogen activation, and receptor-mediatedendocytosis. The encoded protein of this gene is approximately 45 kD and may assist in the V-ATPase-mediated acidification of neuroendocrinesecretory granules.[7]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000071553Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000019087Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Chen EY, Zollo M, Mazzarella R, Ciccodicola A, Chen CN, Zuo L, Heiner C, Burough F, Repetto M, Schlessinger D, D'Urso M (Jun 1997)."Long-range sequence analysis in Xq28: thirteen known and six candidate genes in 219.4 kb of high GC DNA between the RCP/GCP and G6PD loci".Hum Mol Genet.5 (5):659–68.doi:10.1093/hmg/5.5.659.PMID 8733135.
  6. ^Sedlacek Z, Korn B, Konecki DS, Siebenhaar R, Coy JF, Kioschis P, Poustka A (Feb 1994). "Construction of a transcription map of a 300 kb region around the human G6PD locus by direct cDNA selection".Hum Mol Genet.2 (11):1865–9.doi:10.1093/hmg/2.11.1865.PMID 8281148.
  7. ^ab"Entrez Gene: ATP6AP1 ATPase, H+ transporting, lysosomal accessory protein 1".

External links

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Further reading

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