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ATP11B

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens
ATP11B
Identifiers
AliasesATP11B, ATPIF, ATPIR, ATPase phospholipid transporting 11B (putative)
External IDsOMIM:605869;MGI:1923545;HomoloGene:32919;GeneCards:ATP11B;OMA:ATP11B - orthologs
Gene location (Human)
Chromosome 3 (human)
Chr.Chromosome 3 (human)[1]
Chromosome 3 (human)
Genomic location for ATP11B
Genomic location for ATP11B
Band3q26.33Start182,793,503bp[1]
End182,921,629bp[1]
Gene location (Mouse)
Chromosome 3 (mouse)
Chr.Chromosome 3 (mouse)[2]
Chromosome 3 (mouse)
Genomic location for ATP11B
Genomic location for ATP11B
Band3|3 BStart35,808,255bp[2]
End35,910,425bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • Achilles tendon

  • epithelium of colon

  • bone marrow cell

  • sperm

  • gingival epithelium

  • secondary oocyte

  • Skeletal muscle tissue of rectus abdominis

  • oral cavity

  • tonsil

  • germinal epithelium
Top expressed in
  • neural layer of retina

  • granulocyte

  • cumulus cell

  • large intestine

  • colon

  • left colon

  • epithelium of small intestine

  • pyloric antrum

  • blood

  • jejunum
More reference expression data
BioGPS




More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

23200

76295

Ensembl

ENSG00000058063

ENSMUSG00000037400

UniProt

Q9Y2G3

Q6DFW5

RefSeq (mRNA)

NM_014616

NM_029570

RefSeq (protein)

NP_055431

NP_083846

Location (UCSC)Chr 3: 182.79 – 182.92 MbChr 3: 35.81 – 35.91 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Probable phospholipid-transporting ATPase IF is anenzyme encoded by theATP11Bgene in humans.[5][6][7]

Function

[edit]

P-typeATPases, such as ATP11B, arephosphorylated in their intermediate state and drive uphill transport of ions across membranes. Several subfamilies of P-type ATPases have been identified. One subfamily transports heavy metal ions, such as Cu(2+) or Cd(2+). Another subfamily transports non-heavy metal ions, such as H(+), Na(+), K(+), or Ca(+). A third subfamily transports amphipaths, such asphosphatidylserine.[7]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000058063Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000037400Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Nagase T, Ishikawa K, Suyama M, Kikuno R, Hirosawa M, Miyajima N, Tanaka A, Kotani H, Nomura N, Ohara O (Feb 1999)."Prediction of the coding sequences of unidentified human genes. XIII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro".DNA Research.6 (1):63–70.doi:10.1093/dnares/6.1.63.PMID 10231032.
  6. ^Halleck MS, Lawler JF JR, Blackshaw S, Gao L, Nagarajan P, Hacker C, Pyle S, Newman JT, Nakanishi Y, Ando H, Weinstock D, Williamson P, Schlegel RA (Nov 1999). "Differential expression of putative transbilayer amphipath transporters".Physiological Genomics.1 (3):139–50.doi:10.1152/physiolgenomics.1999.1.3.139.PMID 11015572.S2CID 762447.
  7. ^ab"Entrez Gene: ATP11B ATPase, Class VI, type 11B".

External links

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Further reading

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