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ASCL2

From Wikipedia, the free encyclopedia
Protein-coding gene in humans
ASCL2
Identifiers
AliasesASCL2, ASH2, HASH2, MASH2, bHLHa45, achaete-scute family bHLH transcription factor 2
External IDsOMIM:601886;MGI:96920;HomoloGene:3789;GeneCards:ASCL2;OMA:ASCL2 - orthologs
Gene location (Human)
Chromosome 11 (human)
Chr.Chromosome 11 (human)[1]
Chromosome 11 (human)
Genomic location for ASCL2
Genomic location for ASCL2
Band11p15.5Start2,268,498bp[1]
End2,270,588bp[1]
Gene location (Mouse)
Chromosome 7 (mouse)
Chr.Chromosome 7 (mouse)[2]
Chromosome 7 (mouse)
Genomic location for ASCL2
Genomic location for ASCL2
Band7 F5|7 88.08 cMStart142,520,566bp[2]
End142,523,001bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • granulocyte

  • parotid gland

  • decidua

  • monocyte

  • testicle

  • gingival epithelium

  • mucosa of transverse colon

  • palpebral conjunctiva

  • mucosa of ileum

  • blood
Top expressed in
  • trophoblast cell

  • chorion

  • Paneth cell

  • rib

  • lacrimal gland

  • embryo

  • female urethra

  • basisphenoid

  • granulocyte

  • hair
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

430

17173

Ensembl

ENSG00000183734

ENSMUSG00000009248

UniProt

Q99929

O35885

RefSeq (mRNA)

NM_005170

NM_008554

RefSeq (protein)

NP_005161

NP_032580

Location (UCSC)Chr 11: 2.27 – 2.27 MbChr 7: 142.52 – 142.52 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Achaete-scute complex homolog 2 (Drosophila), also known asASCL2, is animprinted humangene.[5]

Function

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This gene is a member of the basic helix-loop-helix (BHLH) family of transcription factors. It activates transcription by binding to the E box (5'-CANNTG-3'). Dimerization with other BHLH proteins is required for efficient DNA binding. Involved in the determination of the neuronal precursors in the peripheral nervous system and the central nervous system.[5]

Ascl2 plays a critical role in early gestation, with its products showing up in the oocyte and the two-cell stage of the zygote. This gene has its primary role after implantation of the developing embryo. It is expressed in trophoblast cells on the maternal allele. Its expression is required for the progenitor cells within the ectoplacental cone (EPC), which establishes the first functional maternal-fetal interactions before placental development is completed. The ectoplacental cone continues to develop and differentiate into other cell types which express the Ascl2 gene in the differentiated derivatives. It is specifically found in the spongiotrophoblast cells of the junctional zone. In the mature placenta, glycogen trophoblast (Gly2) cells are found in the junctional zone. Without Ascl2, the GlyT cells are not found and even though these cells develop later in gestation, its progenitor cells are established early on. If a null allele is inherited, the embryo will fail to develop. Insufficient Ascl2 function is also associated with a placenta that has phenotypic defects, which leads to growth retardation.[6]

Achaete-scute complex homolog 2 (ASCL2) is a maternally expressed imprinted gene that codes is a part of the basic helix-loop-helix (BHLH) transcription factor family. ASCL2 is particularly important during implantation of the developing embryo, specifically in placental development and neuronal precursor determination. Loss of function of ASCL2 will result in embryonic failure. In 2006, ASCL2 was observed to be involved in tumor progression, specifically, ASCL2 was reported to be upregulated in colorectal tumors (Jubb et al). In 2010, Tian et al reported that ASCL2's involvement in metastasis could be attributed by ASCL2-promoted cellular self-renewal as opposed to cellular differentiation. In 2019, Farmarzi reported a potential link between ASCL2 and breast cancer tumorigenesis which had never previously been demonstrated. ASCL2 expression was noted in multiple breast cancer cell lines, most notably in MCF7 cells. siRNA KO of ASCL2 was shown to inhibit cellular migration of breast cancer cells. Further, ASCL2 knockdown altered the expression of BIRC5 and CD44, which are Wnt-associated genes.

Interactions

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ASCL2 has been shown tointeract withNCOA6[7] andRBBP5.[7]

See also

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References

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  1. ^abcGRCh38: Ensembl release 89: ENSG00000183734Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000009248Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ab"Entrez Gene: ASCL2 achaete-scute complex homolog 2 (Drosophila)".
  6. ^Bogutz AB, Oh-McGinnis R, Jacob KJ, Ho-Lau R, Gu T, Gertsenstein M, Nagy A, Lefebvre L (August 2018)."Transcription factor ASCL2 is required for development of the glycogen trophoblast cell lineage".PLOS Genetics.14 (8) e1007587.doi:10.1371/journal.pgen.1007587.PMC 6105033.PMID 30096149.
  7. ^abGoo YH, Sohn YC, Kim DH, Kim SW, Kang MJ, Jung DJ, Kwak E, Barlev NA, Berger SL, Chow VT, Roeder RG, Azorsa DO, Meltzer PS, Suh PG, Song EJ, Lee KJ, Lee YC, Lee JW (January 2003)."Activating signal cointegrator 2 belongs to a novel steady-state complex that contains a subset of trithorax group proteins".Molecular and Cellular Biology.23 (1):140–149.doi:10.1128/MCB.23.1.140-149.2003.PMC 140670.PMID 12482968.

External links

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Further reading

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(1) Basic domains
(1.1) Basicleucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3)bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2)Zinc finger DNA-binding domains
(2.1)Nuclear receptor(Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3.1)Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3)Fork head /winged helix
(3.4)Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4)β-Scaffold factors with minor groove contacts
(4.1)Rel homology region
(4.2)STAT
(4.3) p53-like
(4.4)MADS box
(4.6)TATA-binding proteins
(4.7)High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3)Pocket domain
(0.5)AP-2/EREBP-related factors
(0.6) Miscellaneous
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