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ABCB4

From Wikipedia, the free encyclopedia
Protein-coding gene in humans
ABCB4
Identifiers
AliasesABCB4, ABC21, GBD1, ICP3, MDR2, MDR2/3, MDR3, PFIC-3, PGY3, ATP binding cassette subfamily B member 4
External IDsOMIM:171060;MGI:97569;HomoloGene:136368;GeneCards:ABCB4;OMA:ABCB4 - orthologs
EC number7.6.2.2
Gene location (Human)
Chromosome 7 (human)
Chr.Chromosome 7 (human)[1]
Chromosome 7 (human)
Genomic location for ABCB4
Genomic location for ABCB4
Band7q21.12Start87,401,696bp[1]
End87,480,435bp[1]
Gene location (Mouse)
Chromosome 5 (mouse)
Chr.Chromosome 5 (mouse)[2]
Chromosome 5 (mouse)
Genomic location for ABCB4
Genomic location for ABCB4
Band5 A1|5 3.43 cMStart8,943,717bp[2]
End9,009,231bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • right lobe of liver

  • secondary oocyte

  • buccal mucosa cell

  • testicle

  • right adrenal gland

  • left adrenal gland

  • right adrenal cortex

  • left adrenal cortex

  • biceps brachii

  • spleen
Top expressed in
  • left lobe of liver

  • tibialis anterior muscle

  • vastus lateralis muscle

  • extensor digitorum longus muscle

  • plantaris muscle

  • tibiofemoral joint

  • ankle

  • gastrocnemius muscle

  • muscle of thigh

  • triceps brachii muscle
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

5244

18670

Ensembl

ENSG00000005471

ENSMUSG00000042476

UniProt

P21439

P21440

RefSeq (mRNA)

NM_000443
NM_018849
NM_018850

NM_008830

RefSeq (protein)

NP_000434
NP_061337
NP_061338

NP_032856

Location (UCSC)Chr 7: 87.4 – 87.48 MbChr 5: 8.94 – 9.01 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

TheATP-binding cassette 4 (ABCB4)gene encodesmultidrug resistance protein 3.[5][6][7]ABCB4 is associated withprogressive familial intrahepatic cholestasis type 3 andintrahepatic cholestasis of pregnancy.

The membrane-associatedprotein encoded by this gene is a member of the superfamily ofATP-binding cassette (ABC) transporters. ABC proteins transport various molecules across extra- and intra-cellular membranes. ABC genes are divided into seven distinct subfamilies (ABC1, MDR/TAP, MRP, ALD, OABP, GCN20, White). This protein is a member of the MDR/TAP subfamily. Members of the MDR/TAP subfamily are involved in multidrug resistance as well as antigen presentation. This gene encodes a full transporter and member of the p-glycoprotein family of membrane proteins with phosphatidylcholine as its substrate (flippase activity). The function of this protein has not yet been determined; however, it may involve transport of phospholipids from liver hepatocytes into bile. Alternative splicing of this gene results in several products of undetermined function.[7]

Cancer

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ABCB4 gene has been observed progressively downregulated inhuman papillomavirus-positiveneoplastic keratinocytes derived from uterine cervical preneoplastic lesions at different levels of malignancy.[8] For this reason, ABCB4 is likely to be associated with tumorigenesis and may be a potential prognostic marker for uterine cervical preneoplastic lesions progression.[8]

Other conditions that have been associated with mutations in this gene includelow phospholipid associated cholelithiasis syndrome, high gamma glutamyl transferase intrahepatic cholestasis of pregnancy, chronic cholangiopathy and adult biliary fibrosis.[9]

References

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  1. ^abcGRCh38: Ensembl release 89: ENSG00000005471Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000042476Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Van der Bliek AM, Baas F, Ten Houte de Lange T, Kooiman PM, Van der Velde-Koerts T, Borst P (Mar 1988)."The human mdr3 gene encodes a novel P-glycoprotein homologue and gives rise to alternatively spliced mRNAs in liver".The EMBO Journal.6 (11):3325–31.doi:10.1002/j.1460-2075.1987.tb02653.x.PMC 553787.PMID 2892668.
  6. ^Rosmorduc O, Hermelin B, Poupon R (Apr 2001)."MDR3 gene defect in adults with symptomatic intrahepatic and gallbladder cholesterol cholelithiasis".Gastroenterology.120 (6):1459–67.doi:10.1053/gast.2001.23947.PMID 11313316.
  7. ^ab"Entrez Gene: ABCB4 ATP-binding cassette, sub-family B (MDR/TAP), member 4".
  8. ^abRotondo JC, Bosi S, Bassi C, Ferracin M, Lanza G, Gafà R, Magri E, Selvatici R, Torresani S, Marci R, Garutti P, Negrini M, Tognon M, Martini F (April 2015). "Gene expression changes in progression of cervical neoplasia revealed by microarray analysis of cervical neoplastic keratinocytes".J Cell Physiol.230 (4):802–812.doi:10.1002/jcp.24808.hdl:11392/2066612.PMID 25205602.S2CID 24986454.
  9. ^Sticova E, Jirsa M (2019) ABCB4 disease: Many faces of one gene deficiency. Ann Hepatol

Further reading

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External links

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