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40S ribosomal protein S8

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens
RPS8
Available structures
PDBOrtholog search:PDBeRCSB
List of PDB id codes

4UG0,4V6X,5A2Q,5AJ0,3J7P,4UJE,4D5L,3J7R,4UJD,5FLX,4D61,4UJC

Identifiers
AliasesRPS8, S8, ribosomal protein S8
External IDsOMIM:600357;MGI:98166;HomoloGene:133143;GeneCards:RPS8;OMA:RPS8 - orthologs
Gene location (Human)
Chromosome 1 (human)
Chr.Chromosome 1 (human)[1]
Chromosome 1 (human)
Genomic location for RPS8
Genomic location for RPS8
Band1p34.1Start44,775,251bp[1]
End44,778,779bp[1]
Gene location (Mouse)
Chromosome 4 (mouse)
Chr.Chromosome 4 (mouse)[2]
Chromosome 4 (mouse)
Genomic location for RPS8
Genomic location for RPS8
Band4|4 D1Start117,011,024bp[2]
End117,013,440bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • left ovary

  • right ovary

  • canal of the cervix

  • body of uterus

  • fallopian tube

  • left adrenal cortex

  • ganglionic eminence

  • right uterine tube

  • right adrenal gland

  • lymph node
Top expressed in
  • ventricular zone

  • epiblast

  • ganglionic eminence

  • uterus

  • esophagus

  • ovary

  • embryo

  • ileum

  • duodenum

  • lens
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

6202

20116

Ensembl

ENSG00000142937

ENSMUSG00000047675

UniProt

P62241

P62242

RefSeq (mRNA)

NM_001012

NM_009098

RefSeq (protein)

NP_001003

NP_033124

Location (UCSC)Chr 1: 44.78 – 44.78 MbChr 4: 117.01 – 117.01 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

40S ribosomal protein S8 is aprotein that in humans is encoded by theRPS8gene.[5][6]

Ribosomes, theorganelles thatcatalyzeprotein synthesis, consist of asmall 40S subunit and alarge 60S subunit. Together these subunits are composed of 4RNA species and approximately 80 structurally distinct proteins. This gene encodes aribosomal protein that is a component of the 40S subunit. The protein belongs to the S8E family of ribosomal proteins. It is located in the cytoplasm. Increased expression of this gene incolorectal tumors andcolon polyps compared to matched normalcolonic mucosa has been observed. This gene is co-transcribed with thesmall nucleolar RNA genes U38A, U38B, U39, and U40, which are located in its fourth, fifth, first, and second introns, respectively. As is typical for genes encodingribosomal proteins, there are multiple processedpseudogenes of this gene dispersed through the genome.[6]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000142937Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000047675Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Davies B, Fried M (Mar 1993). "The structure of the human intron-containing S8 ribosomal protein gene and determination of its chromosomal location at 1p32-p34.1".Genomics.15 (1):68–75.doi:10.1006/geno.1993.1011.PMID 8432552.
  6. ^ab"Entrez Gene: RPS8 ribosomal protein S8".

Further reading

[edit]


Proteins
Initiation factor
Bacterial
Mitochondrial
Archaeal
Eukaryotic
eIF1
eIF2
eIF3
eIF4
eIF5
eIF6
Elongation factor
Bacterial/Mitochondrial
Archaeal/Eukaryotic
Release factor
Ribosomal Proteins
Cytoplasmic
60S subunit
40S subunit
Mitochondrial
39S subunit
28S subunit
Other concepts
Archaea
(70S)
Bacteria
(70S)
Eukaryotes
Cytoplasmic (80S)
Mitochondrial (55S)
Chloroplast (70S)
Ribosomal proteins
(See article table)


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