The qualifying round matches of the1999–2000 UEFA Cup were played on 12 and 26 August 2000. The round consisted of 38 matches.
The following 76 teams participated in the qualifying round.[1]
| Key to colours |
|---|
| Winners of qualifying round advanced tofirst round |
Notes
The seeding groups were as follows:[2]
| Group 1 | Group 2 | Group 3 | Group 4 | ||||
|---|---|---|---|---|---|---|---|
| Seeded | Unseeded | Seeded | Unseeded | Seeded | Unseeded | Seeded | Unseeded |
| Group 5 | Group 6 | Group 7 | Group 8 | ||||
| Seeded | Unseeded | Seeded | Unseeded | Seeded | Unseeded | Seeded | Unseeded |
| Group 9 | Group 10 | ||||||
| Seeded | Unseeded | Seeded | Unseeded | ||||
| Team 1 | Agg. Tooltip Aggregate score | Team 2 | 1st leg | 2nd leg |
|---|---|---|---|---|
| Shakhtar Donetsk | 4–3 | 3–1 | 1–2 | |
| HJK | 2–1[a] | 2–0 | 0–1 | |
| Locomotive Tbilisi | 2–1 | 1–0 | 1–1 | |
| Sheriff Tiraspol | 1–1 (a) | 1–1 | 0–0 | |
| Yerevan | 1–4 | 0–2 | 1–2 | |
| Neftçi | 2–4 | 2–3 | 0–1 | |
| Vllaznia | 1–3[a] | 1–1 | 0–2 | |
| BATE Borisov | 1–12 | 1–7 | 0–5 | |
| Lantana | 2–9[a] | 0–5 | 2–4 | |
| Liepājas Metalurgs | 4–5 | 3–2 | 1–3 | |
| HIT Gorica | 2–1 | 2–0 | 0–1 | |
| Vojvodina | 5–1[a] | 4–0 | 1–1 | |
| Viljandi Tulevik | 0–5 | 0–3 | 0–2 | |
| Belshina Bobruisk | 1–8 | 1–5 | 0–3 | |
| Kryvbas Kryvyi Rih | 5–0 | 3–0 | 2–0 | |
| KÍ | 0–9 | 0–5 | 0–4 | |
| Rīga | 0–5 | 0–0 | 0–5 | |
| VPS | 1–3 | 1–1 | 0–2 | |
| Inter Slovnaft Bratislava | 5–1 | 3–1 | 2–0 | |
| Bodø/Glimt | 3–1 | 1–0 | 2–1 | |
| Viking | 18–0 | 7–0 | 11–0 | |
| Maccabi Tel Aviv | 4–3 | 3–1 | 1–2 | |
| Steaua București | 7–1 | 3–0 | 4–1 | |
| Lyngby | 7–0 | 7–0 | 0–0 | |
| Ankaragücü | 2–0 | 1–0 | 1–0 | |
| Sliema Wanderers | 0–4[a] | 0–3 | 0–1 | |
| Grasshopper | 8–0 | 4–0 | 4–0 | |
| IFK Göteborg | 3–1 | 3–0 | 0–1 | |
| Mondercange | 2–13 | 2–6 | 0–7 | |
| Vardar | 0–9 | 0–5 | 0–4 | |
| APOEL | 0–2 | 0–0 | 0–2 | |
| Anderlecht | 9–1 | 6–1 | 3–0 | |
| Olimpija Ljubljana | 3–3 (a) | 1–1 | 2–2 | |
| Hajduk Split | 6–1 | 5–0 | 1–1 | |
| Cwmbrân Town | 0–10 | 0–6 | 0–4 | |
| Portadown | 0–8[a] | 0–3 | 0–5 | |
| Ferencváros | 4–2 | 3–1 | 1–1 | |
| KR | 1–2 | 1–0 | 0–2 (a.e.t.) |
Shakhtar Donetsk won 4–3 on aggregate.
| Shirak | 1–0 | |
|---|---|---|
| Report |
HJK won 2–1 on aggregate.
Locomotive Tbilisi won 2–1 on aggregate.
1–1 on aggregate; Sigma Olomouc won on away goals.
| Yerevan | 0–2 | |
|---|---|---|
| Report |
|
Hapoel Tel Aviv won 4–1 on aggregate.
| Neftçi | 2–3 | |
|---|---|---|
| Report |
Red Star Belgrade won 4–2 on aggregate.
| Vllaznia | 1–1 | |
|---|---|---|
| Report |
|
| Spartak Trnava | 2–0 | |
|---|---|---|
| Report |
Spartak Trnava won 3–1 on aggregate.
| BATE Borisov | 1–7 | |
|---|---|---|
| Report |
|
| Lokomotiv Moscow | 5–0 | |
|---|---|---|
| Report |
Lokomotiv Moscow won 12–1 on aggregate.
| Lantana | 0–5 | |
|---|---|---|
| Report |
|
| Torpedo Kutaisi | 4–2 | |
|---|---|---|
| Report |
Torpedo Kutaisi won 9–2 on aggregate.
| Lech Poznań | 3–1 | |
|---|---|---|
| Report |
|
Lech Poznań won 5–4 on aggregate.
HIT Gorica won 2–1 on aggregate.
Vojvodina won 5–1 on aggregate.
| Viljandi Tulevik | 0–3 | |
|---|---|---|
| Report |
|
Club Brugge won 5–0 on aggregate.
| Belshina Bobruisk | 1–5 | |
|---|---|---|
| Report |
|
| Omonia | 3–0 | |
|---|---|---|
| Report |
Omonia won 8–1 on aggregate.
| Shamkir | 0–2 | |
|---|---|---|
| Report |
|
Kryvbas Kryvyi Rih won 5–0 on aggregate.
GAK won 9–0 on aggregate.
| Helsingborgs IF | 5–0 | |
|---|---|---|
| Report |
Helsingborgs IF won 5–0 on aggregate.
| VPS | 1–1 | |
|---|---|---|
| Report |
|
| St Johnstone | 2–0 | |
|---|---|---|
| Report |
St Johnstone won 3–1 on aggregate.
| Inter Slovnaft Bratislava | 3–1 | |
|---|---|---|
| Report |
|
| Bylis | 0–2 | |
|---|---|---|
| Report |
|
Inter Slovnaft Bratislava won 5–1 on aggregate.
| Vaduz | 1–2 | |
|---|---|---|
| Report |
|
Bodø/Glimt won 3–1 on aggregate.
| Principat | 0–11 | |
|---|---|---|
| Report |
|
Viking won 18–0 on aggregate.
| Kaunas | 2–1 | |
|---|---|---|
| Report |
|
Maccabi Tel Aviv won 4–3 on aggregate.
| Levadia Maardu | 1–4 | |
|---|---|---|
| Report |
|
Steaua București won 7–1 on aggregate.
Lyngby won 7–0 on aggregate.
| Ankaragücü | 1–0 | |
|---|---|---|
| Report |
| B36 | 0–1 | |
|---|---|---|
| Report |
|
Ankaragücü won 2–0 on aggregate.
| Sliema Wanderers | 0–3 | |
|---|---|---|
| Report |
|
Zürich won 4–0 on aggregate.
Grasshopper won 8–0 on aggregate.
| IFK Göteborg | 3–0 | |
|---|---|---|
| Report |
IFK Göteborg won 3–1 on aggregate.
Dinamo București won 13–2 on aggregate.
| Vardar | 0–5 | |
|---|---|---|
| Report |
|
| Legia Warsaw | 4–0 | |
|---|---|---|
| Report |
Legia Warsaw won 9–0 on aggregate.
Levski Sofia won 2–0 on aggregate.
| Anderlecht | 6–1 | |
|---|---|---|
| Report |
| Leiftur | 0–3 | |
|---|---|---|
| Report |
|
Anderlecht won 9–1 on aggregate.
| Olimpija Ljubljana | 1–1 | |
|---|---|---|
| Report |
|
| Kareda | 2–2 | |
|---|---|---|
| Report |
3–3 on aggregate; Olimpija Ljubljana won on away goals.
| F91 Dudelange | 1–1 | |
|---|---|---|
| Report |
|
Hajduk Split won 6–1 on aggregate.
Celtic won 10–0 on aggregate.
CSKA Sofia won 8–0 on aggregate.
Ferencváros won 4–2 on aggregate.
| KR | 1–0 | |
|---|---|---|
| Report |
| Kilmarnock | 2–0 (a.e.t.) | |
|---|---|---|
| Report |
Kilmarnock won 2–1 on aggregate.