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Membrane-associated transporter protein

From Wikipedia, the free encyclopedia
(Redirected fromSLC45A2)
Protein

SLC45A2
Identifiers
AliasesSLC45A2, 1A1, AIM1, MATP, OCA4, SHEP5, solute carrier family 45 member 2
External IDsOMIM:606202;MGI:2153040;HomoloGene:9412;GeneCards:SLC45A2;OMA:SLC45A2 - orthologs
Gene location (Human)
Chromosome 5 (human)
Chr.Chromosome 5 (human)[1]
Chromosome 5 (human)
Genomic location for SLC45A2
Genomic location for SLC45A2
Band5p13.2Start33,944,623bp[1]
End33,984,693bp[1]
Gene location (Mouse)
Chromosome 15 (mouse)
Chr.Chromosome 15 (mouse)[2]
Chromosome 15 (mouse)
Genomic location for SLC45A2
Genomic location for SLC45A2
Band15 A1|15 5.4 cMStart11,000,807bp[2]
End11,029,319bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • testicle

  • retinal pigment epithelium

  • gonad

  • right lobe of liver

  • islet of Langerhans

  • right auricle of heart

  • skin of leg

  • hypothalamus

  • human kidney

  • fundus
Top expressed in
  • iris

  • stria vascularis

  • hair follicle

  • gastrula

  • ciliary body

  • surface ectoderm

  • embryo

  • primary oocyte

  • cornea

  • cochlea
More reference expression data
BioGPS


More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

51151

22293

Ensembl

ENSG00000281919
ENSG00000164175

ENSMUSG00000022243

UniProt

Q9UMX9

P58355

RefSeq (mRNA)

NM_001012509
NM_001297417
NM_016180

NM_053077

RefSeq (protein)

NP_001012527
NP_001284346
NP_057264

NP_444307

Location (UCSC)Chr 5: 33.94 – 33.98 MbChr 15: 11 – 11.03 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Membrane-associated transporter protein (MATP), also known assolute carrier family 45 member 2 (SLC45A2) ormelanoma antigen AIM1, is aprotein that in humans is encoded by theSLC45A2gene.[5][6][7]

In human, the SLC45A2 gene is located on the short (p) arm ofchromosome 5 at position 13.2.

Function

[edit]

SLC45A2 is atransporter protein that mediatesmelanin synthesis. It may regulate thepH of themelanosome, affectingtyrosinase activity.[8] SLC45A2 is also amelanocyte differentiation antigen that is expressed in a high percentage ofmelanoma cell lines.[9] A similar sequence gene inmedaka fish, 'B,' encodes a transporter that mediates melanin synthesis. Mutations in this gene are a cause ofoculocutaneous albinism type 4. Alternative splicing results in multiple transcript variants encoding different isoforms.[7] Protein expression is localized to the melanosome, and analysis of the by knockdown of RNA expression leads to altered melanosome pH potentially altering tyrosinase function by affecting copper binding.[10]

Inmelanocytic cell types, the SLC45A2 gene is regulated bymicrophthalmia-associated transcription factor.[11][12]

SLC45A2 has been found to play a role in pigmentation in several species. In humans, it has been identified as a factor in thelight skin of Europeans and as anancestry-informative marker for distinguishing Sri Lankan from European ancestry.[13] Mutations in the gene have also been identified as the cause of human Type IVoculocutaneous albinism.[14] SLC45A2 is the so-calledcream gene responsible in horses for buckskin, palomino and cremello coloration, while a mutation in this gene underlies thewhite tiger variant.[15] In dogs a mutation to this gene causes white fur, pink skin, and blue eyes.[16]

SLC45A2 was identified as amelanoma tumor-associated antigen with high tumor specificity and reduced potential for autoimmune toxicity, and is currently in clinical development as a target for T-cell based immunotherapy.[17]

See also

[edit]
  • Evolution and divergence of light skin mutations and alleles. The SLC45A2 contributes to pigmentation in Europeans.
    Solute carrier family

References

[edit]
  1. ^abcENSG00000164175 GRCh38: Ensembl release 89: ENSG00000281919, ENSG00000164175Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000022243Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Nakayama K, Fukamachi S, Kimura H, Koda Y, Soemantri A, Ishida T (Mar 2002)."Distinctive distribution of AIM1 polymorphism among major human populations with different skin color".Journal of Human Genetics.47 (2):92–4.doi:10.1007/s100380200007.PMID 11916009.
  6. ^Newton JM, Cohen-Barak O, Hagiwara N, Gardner JM, Davisson MT, King RA, et al. (November 2001)."Mutations in the human orthologue of the mouse underwhite gene (uw) underlie a new form of oculocutaneous albinism, OCA4".American Journal of Human Genetics.69 (5):981–8.doi:10.1086/324340.PMC 1274374.PMID 11574907.
  7. ^ab"Entrez Gene: SLC45A2 solute carrier family 45, member 2".
  8. ^Mariat D, Taourit S, Guérin G (2003)."A mutation in the MATP gene causes the cream coat colour in the horse".Genetics, Selection, Evolution.35 (1):119–133.doi:10.1186/1297-9686-35-1-119.PMC 2732686.PMID 12605854.
  9. ^Harada M, Li YF, El-Gamil M, Rosenberg SA, Robbins PF (February 2001)."Use of an in vitro immunoselected tumor line to identify shared melanoma antigens recognized by HLA-A*0201-restricted T cells".Cancer Research.61 (3):1089–94.PMID 11221837.
  10. ^Bin BH, Bhin J, Yang SH, Shin M, Nam YJ, Choi DH, et al. (2015)."Membrane-Associated Transporter Protein (MATP) Regulates Melanosomal pH and Influences Tyrosinase Activity".PLOS ONE.10 (6) e0129273.Bibcode:2015PLoSO..1029273B.doi:10.1371/journal.pone.0129273.PMC 4461305.PMID 26057890.
  11. ^Du J, Fisher DE (January 2002)."Identification of Aim-1 as the underwhite mouse mutant and its transcriptional regulation by MITF".The Journal of Biological Chemistry.277 (1):402–6.doi:10.1074/jbc.M110229200.PMID 11700328.
  12. ^Hoek KS, Schlegel NC, Eichhoff OM, Widmer DS, Praetorius C, Einarsson SO, et al. (December 2008)."Novel MITF targets identified using a two-step DNA microarray strategy".Pigment Cell & Melanoma Research.21 (6):665–76.doi:10.1111/j.1755-148X.2008.00505.x.PMID 19067971.S2CID 24698373.
  13. ^Soejima M, Koda Y (January 2007). "Population differences of two coding SNPs in pigmentation-related genes SLC24A5 and SLC45A2".International Journal of Legal Medicine.121 (1):36–9.doi:10.1007/s00414-006-0112-z.PMID 16847698.S2CID 11192076.
  14. ^"OMIM Entry - #606574 - ALBINISM, OCULOCUTANEOUS, TYPE IV; OCA4".Mendelian Inheritance in Man.Johns Hopkins University. Retrieved2020-08-05.
  15. ^Xu X, Dong GX, Hu XS, Miao L, Zhang XL, Zhang DL, et al. (June 2013)."The genetic basis of white tigers".Current Biology.23 (11):1031–5.Bibcode:2013CBio...23.1031X.doi:10.1016/j.cub.2013.04.054.PMID 23707431.
  16. ^Wijesena HR, Schmutz SM (May–June 2015)."A Missense Mutation in SLC45A2 Is Associated with Albinism in Several Small Long Haired Dog Breeds".The Journal of Heredity.106 (3):285–8.doi:10.1093/jhered/esv008.PMID 25790827.
  17. ^Park J, Talukder AH, Lim SA, Kim K, Pan K, Melendez B, et al. (August 2017)."SLC45A2: A Melanoma Antigen with High Tumor Selectivity and Reduced Potential for Autoimmune Toxicity".Cancer Immunology Research.5 (8):618–629.doi:10.1158/2326-6066.CIR-17-0051.PMC 6087543.PMID 28630054.

Further reading

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External links

[edit]
Wikimedia Commons has media related toSLC45A2.

This article incorporates text from theUnited States National Library of Medicine, which is in thepublic domain.

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