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Proceedings ofBioNLP 15
Kevin Bretonnel Cohen|Dina Demner-Fushman|Sophia Ananiadou|Jun-ichi Tsujii

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Complex Event Extraction usingDRUM
James Allen|Will de Beaumont|Lucian Galescu|Choh Man Teng

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Making the most of limited training data using distant supervision
Roland Roller|Mark Stevenson

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An extended dependency graph for relation extraction in biomedical texts
Yifan Peng|Samir Gupta|Cathy Wu|Vijay Shanker

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Event Extraction in pieces:Tackling the partial event identification problem on unseen corpora
Chrysoula Zerva|Sophia Ananiadou

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Extracting Biological Pathway Models FromNLP Event Representations
Michael Spranger|Sucheendra Palaniappan|Samik Ghosh

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Shallow Training is cheap but is it good enough? Experiments with Medical Fact Coding
Ramesh Nallapati|Radu Florian

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Stacked Generalization for Medical Concept Extraction from Clinical Notes
Youngjun Kim|Ellen Riloff

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Extracting Disease-Symptom Relationships by Learning Syntactic Patterns from Dependency Graphs
Mohsen Hassan|Olfa Makkaoui|Adrien Coulet|Yannick Toussaint

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Extracting Time Expressions from Clinical Text
Timothy Miller|Steven Bethard|Dmitriy Dligach|Chen Lin|Guergana Savova

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Exploiting Task-Oriented Resources to Learn Word Embeddings for Clinical Abbreviation Expansion
Yue Liu|Tao Ge|Kusum Mathews|Heng Ji|Deborah McGuinness

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Semantic Type Classification of Common Words in Biomedical Noun Phrases
Amy Siu|Gerhard Weikum

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CoMAGD: Annotation of Gene-Depression Relations
Rize Jin|Jinseon You|Jin-Woo Chung|Hee-Jin Lee|Maria Wolters|Jong Park

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Lexical Characteristics Analysis ofChinese Clinical Documents
Meizhi Ju|Haomin Li|Huilong Duan

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Using word embedding for bio-event extraction
Chen Li|Runqing Song|Maria Liakata|Andreas Vlachos|Stephanie Seneff|Xiangrong Zhang

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Measuring the readability of medical research journal abstracts
Samuel J. Severance|K. Bretonnel Cohen

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Translating Electronic Health Record Notes fromEnglish toSpanish: A Preliminary Study
Weisong Liu|Shu Cai

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Automatic Detection of Answers to Research Questions fromMedline Abstracts
Abdulaziz Alamri|Mark Stevenson

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A preliminary study on automatic identification of patient smoking status in unstructured electronic health records
Jitendra Jonnagaddala|Hong-Jie Dai|Pradeep Ray|Siaw-Teng Liaw

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Restoring the intended structure ofHungarian ophthalmology documents
Borbála Siklósi|Attila Novák

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Evaluating distributed word representations for capturing semantics of biomedical concepts
Muneeb TH|Sunil Sahu|Ashish Anand

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Investigating Public Health Surveillance usingTwitter
Antonio Jimeno Yepes|Andrew MacKinlay|Bo Han

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Clinical Abbreviation Disambiguation Using Neural Word Embeddings
Yonghui Wu|Jun Xu|Yaoyun Zhang|Hua Xu

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Representing Clinical Diagnostic Criteria in Quality Data Model Using Natural Language Processing
Na Hong|Dingcheng Li|Yue Yu|Hongfang Liu|Christopher G. Chute|Guoqian Jiang