Packaging#
Warning
numpy.distutils is deprecated, and will be removed forPython >= 3.12. For more details, seeStatus of numpy.distutils and migration advice
Warning
Note thatsetuptools does major releases often and those may containchanges that breaknumpy.distutils, which willnot be updated anymorefor newsetuptools versions. It is therefore recommended to set anupper version bound in your build configuration for the last known versionofsetuptools that works with your build.
NumPy provides enhanced distutils functionality to make it easier tobuild and install sub-packages, auto-generate code, and extensionmodules that use Fortran-compiled libraries. A usefulConfiguration class is also provided innumpy.distutils.misc_util that can make it easier to constructkeyword arguments to pass to the setup function (by passing thedictionary obtained from the todict() method of the class). Moreinformation is available in thenumpy.distutils user guide.
The choice and location of linked libraries such as BLAS and LAPACK as well asinclude paths and other such build options can be specified in asite.cfgfile located in the NumPy root repository or a.numpy-site.cfg file in yourhome directory. See thesite.cfg.example example file included in the NumPyrepository or sdist for documentation.
Modules innumpy.distutils#
- distutils.misc_util
all_stringsallpathappendpathas_listblue_textcyan_textcyg2win32default_config_dictdict_appenddot_joinexec_mod_from_locationfilter_sourcesgenerate_config_pyget_build_architectureget_cmdget_data_filesget_dependenciesget_ext_source_filesget_frameget_infoget_languageget_lib_source_filesget_mathlibsget_num_build_jobsget_numpy_include_dirsget_pkg_infoget_script_filesgpathsgreen_texthas_cxx_sourceshas_f_sourcesis_local_src_diris_sequenceis_stringmingw32minrelpathnjoinred_textsanitize_cxx_flagsterminal_has_colorsyellow_text
Provides theCCompilerOpt class, used for handling the CPU/hardware optimization, starting from parsing the command arguments, to managing the relation between the CPU baseline and dispatch-able features, also generating the required C headers and ending with compiling the sources with proper compiler's flags. | |
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exec_command | |
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Returns a list of files named 'fname' from 1) System-wide directory (directory-location of this module) 2) Users HOME directory (os.environ['HOME']) 3) Local directory |
Configuration class#
- classnumpy.distutils.misc_util.Configuration(package_name=None,parent_name=None,top_path=None,package_path=None,**attrs)[source]#
Construct a configuration instance for the given package name. Ifparent_name is not None, then construct the package as asub-package of theparent_name package. Iftop_path andpackage_path are None then they are assumed equal tothe path of the file this instance was created in. The setup.pyfiles in the numpy distribution are good examples of how to usethe
Configurationinstance.- todict()[source]#
Return a dictionary compatible with the keyword arguments of distutilssetup function.
Examples
>>>setup(**config.todict())
- get_subpackage(subpackage_name,subpackage_path=None,parent_name=None,caller_level=1)[source]#
Return list of subpackage configurations.
- Parameters:
- subpackage_namestr or None
Name of the subpackage to get the configuration. ‘*’ insubpackage_name is handled as a wildcard.
- subpackage_pathstr
If None, then the path is assumed to be the local path plus thesubpackage_name. If a setup.py file is not found in thesubpackage_path, then a default configuration is used.
- parent_namestr
Parent name.
- add_subpackage(subpackage_name,subpackage_path=None,standalone=False)[source]#
Add a sub-package to the current Configuration instance.
This is useful in a setup.py script for adding sub-packages to apackage.
- Parameters:
- subpackage_namestr
name of the subpackage
- subpackage_pathstr
if given, the subpackage path such as the subpackage is insubpackage_path / subpackage_name. If None,the subpackage isassumed to be located in the local path / subpackage_name.
- standalonebool
- add_data_files(*files)[source]#
Add data files to configuration data_files.
- Parameters:
- filessequence
Argument(s) can be either
2-sequence (<datadir prefix>,<path to data file(s)>)
paths to data files where python datadir prefix defaultsto package dir.
Notes
The form of each element of the files sequence is very flexibleallowing many combinations of where to get the files from the packageand where they should ultimately be installed on the system. The mostbasic usage is for an element of the files argument sequence to be asimple filename. This will cause that file from the local path to beinstalled to the installation path of the self.name package (packagepath). The file argument can also be a relative path in which case theentire relative path will be installed into the package directory.Finally, the file can be an absolute path name in which case the filewill be found at the absolute path name but installed to the packagepath.
This basic behavior can be augmented by passing a 2-tuple in as thefile argument. The first element of the tuple should specify therelative path (under the package install directory) where theremaining sequence of files should be installed to (it has nothing todo with the file-names in the source distribution). The second elementof the tuple is the sequence of files that should be installed. Thefiles in this sequence can be filenames, relative paths, or absolutepaths. For absolute paths the file will be installed in the top-levelpackage installation directory (regardless of the first argument).Filenames and relative path names will be installed in the packageinstall directory under the path name given as the first element ofthe tuple.
Rules for installation paths:
file.txt -> (., file.txt)-> parent/file.txt
foo/file.txt -> (foo, foo/file.txt) -> parent/foo/file.txt
/foo/bar/file.txt -> (., /foo/bar/file.txt) -> parent/file.txt
*.txt -> parent/a.txt, parent/b.txtfoo/
*.txt`` -> parent/foo/a.txt, parent/foo/b.txt*/*.txt-> (*,*/*.txt) -> parent/c/a.txt, parent/d/b.txt(sun, file.txt) -> parent/sun/file.txt
(sun, bar/file.txt) -> parent/sun/file.txt
(sun, /foo/bar/file.txt) -> parent/sun/file.txt
(sun,
*.txt) -> parent/sun/a.txt, parent/sun/b.txt(sun, bar/
*.txt) -> parent/sun/a.txt, parent/sun/b.txt(sun/
*,*/*.txt) -> parent/sun/c/a.txt, parent/d/b.txt
An additional feature is that the path to a data-file can actually bea function that takes no arguments and returns the actual path(s) tothe data-files. This is useful when the data files are generated whilebuilding the package.
Examples
Add files to the list of data_files to be included with the package.
>>>self.add_data_files('foo.dat',...('fun',['gun.dat','nun/pun.dat','/tmp/sun.dat']),...'bar/cat.dat',...'/full/path/to/can.dat')
will install these data files to:
<packageinstalldirectory>/foo.datfun/gun.datnun/pun.datsun.datbar/car.datcan.dat
where <package install directory> is the package (or sub-package)directory such as ‘/usr/lib/python2.4/site-packages/mypackage’ (‘C:Python2.4 Lib site-packages mypackage’) or‘/usr/lib/python2.4/site- packages/mypackage/mysubpackage’ (‘C:Python2.4 Lib site-packages mypackage mysubpackage’).
- add_data_dir(data_path)[source]#
Recursively add files under data_path to data_files list.
Recursively add files under data_path to the list of data_files to beinstalled (and distributed). The data_path can be either a relativepath-name, or an absolute path-name, or a 2-tuple where the firstargument shows where in the install directory the data directoryshould be installed to.
- Parameters:
- data_pathseq or str
Argument can be either
2-sequence (<datadir suffix>, <path to data directory>)
path to data directory where python datadir suffix defaultsto package dir.
Notes
Rules for installation paths:
foo/bar->(foo/bar,foo/bar)->parent/foo/bar(gun,foo/bar)->parent/gunfoo/*->(foo/a,foo/a),(foo/b,foo/b)->parent/foo/a,parent/foo/b(gun,foo/*)->(gun,foo/a),(gun,foo/b)->gun(gun/*,foo/*)->parent/gun/a,parent/gun/b/foo/bar->(bar,/foo/bar)->parent/bar(gun,/foo/bar)->parent/gun(fun/*/gun/*,sun/foo/bar)->parent/fun/foo/gun/bar
Examples
For example suppose the source directory contains fun/foo.dat andfun/bar/car.dat:
>>>self.add_data_dir('fun')>>>self.add_data_dir(('sun','fun'))>>>self.add_data_dir(('gun','/full/path/to/fun'))
Will install data-files to the locations:
<packageinstalldirectory>/fun/foo.datbar/car.datsun/foo.datbar/car.datgun/foo.datcar.dat
- add_include_dirs(*paths)[source]#
Add paths to configuration include directories.
Add the given sequence of paths to the beginning of the include_dirslist. This list will be visible to all extension modules of thecurrent package.
- add_headers(*files)[source]#
Add installable headers to configuration.
Add the given sequence of files to the beginning of the headers list.By default, headers will be installed under <python-include>/<self.name.replace(‘.’,’/’)>/ directory. If an item of filesis a tuple, then its first argument specifies the actual installationlocation relative to the <python-include> path.
- Parameters:
- filesstr or seq
Argument(s) can be either:
2-sequence (<includedir suffix>,<path to header file(s)>)
path(s) to header file(s) where python includedir suffix willdefault to package name.
- add_extension(name,sources,**kw)[source]#
Add extension to configuration.
Create and add an Extension instance to the ext_modules list. Thismethod also takes the following optional keyword arguments that arepassed on to the Extension constructor.
- Parameters:
- namestr
name of the extension
- sourcesseq
list of the sources. The list of sources may contain functions(called source generators) which must take an extension instanceand a build directory as inputs and return a source file or list ofsource files or None. If None is returned then no sources aregenerated. If the Extension instance has no sources afterprocessing all source generators, then no extension module isbuilt.
- include_dirs
- define_macros
- undef_macros
- library_dirs
- libraries
- runtime_library_dirs
- extra_objects
- extra_compile_args
- extra_link_args
- extra_f77_compile_args
- extra_f90_compile_args
- export_symbols
- swig_opts
- depends
The depends list contains paths to files or directories that thesources of the extension module depend on. If any path in thedepends list is newer than the extension module, then the modulewill be rebuilt.
- language
- f2py_options
- module_dirs
- extra_infodict or list
dict or list of dict of keywords to be appended to keywords.
Notes
The self.paths(…) method is applied to all lists that may containpaths.
- add_library(name,sources,**build_info)[source]#
Add library to configuration.
- Parameters:
- namestr
Name of the extension.
- sourcessequence
List of the sources. The list of sources may contain functions(called source generators) which must take an extension instanceand a build directory as inputs and return a source file or list ofsource files or None. If None is returned then no sources aregenerated. If the Extension instance has no sources afterprocessing all source generators, then no extension module isbuilt.
- build_infodict, optional
The following keys are allowed:
depends
macros
include_dirs
extra_compiler_args
extra_f77_compile_args
extra_f90_compile_args
f2py_options
language
- add_scripts(*files)[source]#
Add scripts to configuration.
Add the sequence of files to the beginning of the scripts list.Scripts will be installed under the <prefix>/bin/ directory.
- add_installed_library(name,sources,install_dir,build_info=None)[source]#
Similar to add_library, but the specified library is installed.
Most C libraries used with
distutilsare only used to build pythonextensions, but libraries built through this method will be installedso that they can be reused by third-party packages.- Parameters:
- namestr
Name of the installed library.
- sourcessequence
List of the library’s source files. See
add_libraryfor details.- install_dirstr
Path to install the library, relative to the current sub-package.
- build_infodict, optional
The following keys are allowed:
depends
macros
include_dirs
extra_compiler_args
extra_f77_compile_args
extra_f90_compile_args
f2py_options
language
- Returns:
- None
See also
Notes
The best way to encode the options required to link against the specifiedC libraries is to use a “libname.ini” file, and use
get_infotoretrieve the required options (seeadd_npy_pkg_configfor moreinformation).
- add_npy_pkg_config(template,install_dir,subst_dict=None)[source]#
Generate and install a npy-pkg config file from a template.
The config file generated fromtemplate is installed in thegiven install directory, usingsubst_dict for variable substitution.
- Parameters:
- templatestr
The path of the template, relatively to the current package path.
- install_dirstr
Where to install the npy-pkg config file, relatively to the currentpackage path.
- subst_dictdict, optional
If given, any string of the form
@key@will be replaced bysubst_dict[key]in the template file when installed. The installprefix is always available through the variable@prefix@, since theinstall prefix is not easy to get reliably from setup.py.
See also
Notes
This works for both standard installs and in-place builds, i.e. the
@prefix@refer to the source directory for in-place builds.Examples
config.add_npy_pkg_config('foo.ini.in','lib',{'foo':bar})
Assuming the foo.ini.in file has the following content:
[meta]Name=@foo@Version=1.0Description=dummydescription[default]Cflags=-I@prefix@/includeLibs=
The generated file will have the following content:
[meta]Name=barVersion=1.0Description=dummydescription[default]Cflags=-Iprefix_dir/includeLibs=
and will be installed as foo.ini in the ‘lib’ subpath.
When cross-compiling with numpy distutils, it might be necessary touse modified npy-pkg-config files. Using the default/generated fileswill link with the host libraries (i.e. libnpymath.a). Forcross-compilation you of-course need to link with target libraries,while using the host Python installation.
You can copy out the numpy/_core/lib/npy-pkg-config directory, add apkgdir value to the .ini files and set NPY_PKG_CONFIG_PATH environmentvariable to point to the directory with the modified npy-pkg-configfiles.
Example npymath.ini modified for cross-compilation:
[meta]Name=npymathDescription=Portable, core math library implementing C99 standardVersion=0.1[variables]pkgname=numpy._corepkgdir=/build/arm-linux-gnueabi/sysroot/usr/lib/python3.7/site-packages/numpy/_coreprefix=${pkgdir}libdir=${prefix}/libincludedir=${prefix}/include[default]Libs=-L${libdir} -lnpymathCflags=-I${includedir}Requires=mlib[msvc]Libs=/LIBPATH:${libdir} npymath.libCflags=/INCLUDE:${includedir}Requires=mlib
- paths(*paths,**kws)[source]#
Apply glob to paths and prepend local_path if needed.
Applies glob.glob(…) to each path in the sequence (if needed) andprepends the local_path if needed. Because this is called on allsource lists, this allows wildcard characters to be specified in listsof sources for extension modules and libraries and scripts and allowspath-names be relative to the source directory.
- get_build_temp_dir()[source]#
Return a path to a temporary directory where temporary files should beplaced.
- have_f77c()[source]#
Check for availability of Fortran 77 compiler.
Use it inside source generating function to ensure thatsetup distribution instance has been initialized.
Notes
True if a Fortran 77 compiler is available (because a simple Fortran 77code was able to be compiled successfully).
- have_f90c()[source]#
Check for availability of Fortran 90 compiler.
Use it inside source generating function to ensure thatsetup distribution instance has been initialized.
Notes
True if a Fortran 90 compiler is available (because a simple Fortran90 code was able to be compiled successfully)
- get_version(version_file=None,version_variable=None)[source]#
Try to get version string of a package.
Return a version string of the current package or None if the versioninformation could not be detected.
Notes
This method scans files named__version__.py, <packagename>_version.py, version.py, and__svn_version__.py for string variables version, __version__, and<packagename>_version, until a version number is found.
- make_svn_version_py(delete=True)[source]#
Appends a data function to the data_files list that will generate__svn_version__.py file to the current package directory.
Generate package __svn_version__.py file from SVN revision number,it will be removed after python exits but will be availablewhen sdist, etc commands are executed.
Notes
If __svn_version__.py existed before, nothing is done.
This isintended for working with source directories that are in an SVNrepository.
Building installable C libraries#
Conventional C libraries (installed throughadd_library) are not installed, andare just used during the build (they are statically linked). An installable Clibrary is a pure C library, which does not depend on the python C runtime, andis installed such that it may be used by third-party packages. To build andinstall the C library, you just use the methodadd_installed_library instead ofadd_library, which takes the same arguments except for an additionalinstall_dir argument:
..hiddeninacommentsoastobeincludedinrefguidebutnotrendereddocumentation>>>importnumpy.distutils.misc_util>>>config=np.distutils.misc_util.Configuration(None,'','.')>>>withopen('foo.c','w')asf:pass>>>config.add_installed_library('foo',sources=['foo.c'],install_dir='lib')
npy-pkg-config files#
To make the necessary build options available to third parties, you could usethenpy-pkg-config mechanism implemented innumpy.distutils. This mechanism isbased on a .ini file which contains all the options. A .ini file is verysimilar to .pc files as used by the pkg-config unix utility:
[meta]Name: fooVersion: 1.0Description: foo library[variables]prefix = /home/user/locallibdir = ${prefix}/libincludedir = ${prefix}/include[default]cflags = -I${includedir}libs = -L${libdir} -lfooGenerally, the file needs to be generated during the build, since it needs someinformation known at build time only (e.g. prefix). This is mostly automatic ifone uses theConfiguration methodadd_npy_pkg_config. Assuming we have atemplate file foo.ini.in as follows:
[meta]Name: fooVersion: @version@Description: foo library[variables]prefix = @prefix@libdir = ${prefix}/libincludedir = ${prefix}/include[default]cflags = -I${includedir}libs = -L${libdir} -lfooand the following code in setup.py:
>>>config.add_installed_library('foo',sources=['foo.c'],install_dir='lib')>>>subst={'version':'1.0'}>>>config.add_npy_pkg_config('foo.ini.in','lib',subst_dict=subst)
This will install the file foo.ini into the directory package_dir/lib, and thefoo.ini file will be generated from foo.ini.in, where each@version@ will bereplaced bysubst_dict['version']. The dictionary has an additional prefixsubstitution rule automatically added, which contains the install prefix (sincethis is not easy to get from setup.py).
Reusing a C library from another package#
Info are easily retrieved from theget_info function innumpy.distutils.misc_util:
>>>info=np.distutils.misc_util.get_info('npymath')>>>config.add_extension('foo',sources=['foo.c'],extra_info=info)<numpy.distutils.extension.Extension('foo') at 0x...>
An additional list of paths to look for .ini files can be given toget_info.
Conversion of.src files#
NumPy distutils supports automatic conversion of source files named<somefile>.src. This facility can be used to maintain very similarcode blocks requiring only simple changes between blocks. During thebuild phase of setup, if a template file named <somefile>.src isencountered, a new file named <somefile> is constructed from thetemplate and placed in the build directory to be used instead. Twoforms of template conversion are supported. The first form occurs forfiles named <file>.ext.src where ext is a recognized Fortranextension (f, f90, f95, f77, for, ftn, pyf). The second form is usedfor all other cases. SeeConversion of .src files using templates.