Computer Methods and Programs in Biomedicine, Volume 226

Volume 226, November 2022

Section IV:Classification and interpretation

• 
  Yuhan Ding,Weifang Xie,Kelvin Kian Loong Wong,Zhifang Liao:
  DE-MRI myocardial fibrosis segmentation and classification model based on multi-scale self-supervision and transformer.107049
• 
  Weifang Xie,Yuhan Ding,Zhifang Liao,Kelvin Kian Loong Wong:
  Unsupervised domain adaptive myocardial infarction MRI classification diagnostics model based on target domain confused sample resampling.107055

Section V:Others

• 
  Carlos Sevilla-Salcedo,Vandad Imani,Pablo M. Olmos,Vanessa Gómez-Verdejo,Jussi Tohka:
  Multi-task longitudinal forecasting with missing values on Alzheimer's disease.107056

Diagnostics and Decision Support

• 
  Iván Sala-Mira,Pedro García,José-Luis Díez,Jorge Bondia:
  Internal model control based module for the elimination of meal and exercise announcements in hybrid artificial pancreas systems.107061

Section II:Biomedical signal and image processing methods

• 
  Jaesung Yoo,Ilhan Yoo,Ina Youn,Sung-Min Kim,Ri Yu,Kwangsoo Kim,Keewon Kim,Seung-Bo Lee:
  Residual one-dimensional convolutional neural network for neuromuscular disorder classification from needle electromyography signals with explainability.107079

Section III:Modelling & Simulation

• 
  Fernando Galaz Prieto,Atena Rezaei,Maryam Samavaki,Sampsa Pursiainen:
  L1-norm vs. L2-norm fitting in optimizing focal multi-channel tES stimulation: linear and semidefinite programming vs. weighted least squares.107084

Section IV:Classification and interpretation

• 
  Zhi-min Zhang,Jian-ping Zhao,Pi-Jing Wei,Chun-Hou Zheng:
  iPromoter-CLA: Identifying promoters and their strength by deep capsule networks with bidirectional long short-term memory.107087
• 
  Bin Liao,Xiaoyao Jia,Tao Zhang,Ruina Sun:
  DHDIP: An interpretable model for hypertension and hyperlipidemia prediction based on EMR data.107088

Section II:Biomedical signal and image processing methods

• 
  Lisha Zhong,Jia Wu,Shuling He,Fangji Yi,Chen Zeng,Xi Li,Zhangyong Li,Zhiwei Huang:
  Epileptic seizure prediction in intracranial EEG using critical nucleus based on phase transition.107091

Section IV:Classification and interpretation

• 
  Qingbin Zhuang,Senzhong Gan,Liangyu Zhang:
  Human-computer interaction based health diagnostics using ResNet34 for tongue image classification.107096
• 
  Luoyu Lian,Xin Luo,Canyu Pan,Jinlong Huang,Wenshan Hong,Zhendong Xu:
  Lung image segmentation based on DRD U-Net and combined WGAN with Deep Neural Network.107097

Section V:Others

• 
  Zhiyong Xiao,Yixin Su,Zhaohong Deng,Weidong Zhang:
  Efficient Combination of CNN and Transformer for Dual-Teacher Uncertainty-guided Semi-supervised Medical Image Segmentation.107099

Section IV:Classification and interpretation

• 
  Jing Zhu,Shiqing Wei,Xiannian Xie,Changlin Yang,Yizhou Li,Xiaowei Li,Bin Hu:
  Content-based multiple evidence fusion on EEG and eye movements for mild depression recognition.107100

Section II:Biomedical signal and image processing methods

• 
  Dongmei Zhu,Degang Sun,Dongbo Wang:
  Dual attention mechanism network for lung cancer images super-resolution.107101

Section IV:Classification and interpretation

• 
  Tingting Chen,Bing Xu,Hui Chen,Yuanyuan Sun,Jiahang Song,Xinchen Sun,Xizhi Zhang,Wei Hua:
  Transcription factor NFE2L3 promotes the proliferation of esophageal squamous cell carcinoma cells and causes radiotherapy resistance by regulating IL-6.107102
• 
  Meng Xing,Yanbo Zhang,Hongmei Yu,Zhenhuan Yang,Xueling Li,Qiong Li,Yanlin Zhao,Zhiqiang Zhao,Yanhong Luo:
  Predict DLBCL patients' recurrence within two years with Gaussian mixture model cluster oversampling and multi-kernel learning.107103

Section III:Modelling & Simulation

• 
  Weiwei Yu,Dian Jin,Wenfeng Cai,Feng Zhao,Xiaokun Zhang:
  Towards tacit knowledge mining within context: Visual cognitive graph model and eye movement image interpretation.107107

Diagnostics and Decision Support

• 
  Javier Civit-Masot,Alejandro Bañuls-Beaterio,Manuel Domínguez-Morales,Manuel Rivas Pérez,Luis Muñoz-Saavedra,José María Rodríguez Corral:
  Non-small cell lung cancer diagnosis aid with histopathological images using Explainable Deep Learning techniques.107108

Section II:Biomedical signal and image processing methods

• 
  Santosh Kumar,Mithilesh Kumar Chaube,Saeed Hamood Alsamhi,Sachin Kumar Gupta,Mohsen Guizani,Raffaele Gravina,Giancarlo Fortino:
  A novel multimodal fusion framework for early diagnosis and accurate classification of COVID-19 patients using X-ray images and speech signal processing techniques.107109

Section IV:Classification and interpretation

• 
  Xiaolu Zhang,Yiqiang Zheng,Xiaoming Bai,Liquan Cai,Liangming Wang,Shiqiang Wu,Qingfeng Ke,Jianlong Huang:
  Femoral image segmentation based on two-stage convolutional network using 3D-DMFNet and 3D-ResUnet.107110

Section V:Others

• 
  Guido Rovera,Piero Fariselli,Désirée Deandreis:
  Development of a REDCap-based workflow for high-volume relational data analysis on real-time data in a medical department using open source software.107111

Diagnostics and Decision Support

• 
  Zhuangzhuang Li,Wenmei Li,Wei Yan,Rongrong Zhang,Shi-Ping Xie:
  Data-driven learning to identify biomarkers in bipolar disorder.107112
• 
  Bingtao Zhang,Dan Wei,Guanghui Yan,Tao Lei,Haishu Cai,Zhifei Yang:
  Feature-level fusion based on spatial-temporal of pervasive EEG for depression recognition.107113

Section II:Biomedical signal and image processing methods

• 
  Xinyue Zhang,Hongwei Du,Gang Song,Fangxun Bao,Yunfeng Zhang,Wei Wu,Peide Liu:
  X-ray coronary centerline extraction based on C-UNet and a multifactor reconnection algorithm.107114

Section I:Biocybernetics and Big Data

• 
  Siwei Bi,Shanshan Chen,Jingyi Li,Jun Gu:
  Machine learning-based prediction of in-hospital mortality for post cardiovascular surgery patients admitting to intensive care unit: a retrospective observational cohort study based on a large multi-center critical care database.107115

Section II:Biomedical signal and image processing methods

• 
  Didier R. P. R. M. Lustermans,Sina Amirrajab,Mitko Veta,Marcel Breeuwer,Cian M. Scannell:
  Optimized automated cardiac MR scar quantification with GAN-based data augmentation.107116

Section III:Modelling & Simulation

• 
  Maria Gracka,Rui A. Lima,João Mário Miranda,Sebastian Student,Bartlomiej Melka,Ziemowit Ostrowski:
  Red blood cells tracking and cell-free layer formation in a microchannel with hyperbolic contraction: A CFD model validation.107117

Section II:Biomedical signal and image processing methods

• 
  Hasitha Wimalarathna,Sangamanatha Ankmnal Veeranna,Chris Allan,Sumit K. Agrawal,Jagath Samarabandu,Hanif M. Ladak,Prudence Allen:
  Machine learning approaches used to analyze auditory evoked responses from the human auditory brainstem: A systematic review.107118

Section IV:Classification and interpretation

• 
  Matteo Moro,Vito Paolo Pastore,Chiara Tacchino,Paola Durand,Isabella Blanchi,Paolo Moretti,Francesca Odone,Maura Casadio:
  A markerless pipeline to analyze spontaneous movements of preterm infants.107119

Section V:Others

• 
  Tuomas Karhu,Timo Leppänen,Juha Töyräs,Arie Oksenberg,Sami Myllymaa,Sami Nikkonen:
  ABOSA - Freely available automatic blood oxygen saturation signal analysis software: Structure and validation.107120

Section III:Modelling & Simulation

• 
  Violeta Monasterio,Esther Pueyo,José Felix Rodriguez Matas,Jesús Carro:
  Cardiac cells stimulated with an axial current-like waveform reproduce electrophysiological properties of tissue fibers.107121

Section V:Others

• 
  Lucas G. Batista,Pedro Henrique Bugatti,Priscila T. M. Saito:
  Classification of Skin Lesion through Active Learning Strategies.107122

Section II:Biomedical signal and image processing methods

• 
  Janghoon Ahn,Thong Phi Nguyen,Yoon-Ji Kim,Taeyong Kim,Jonghun Yoon:
  Automated analysis of three-dimensional CBCT images taken in natural head position that combines facial profile processing and multiple deep-learning models.107123

Diagnostics and Decision Support

• 
  Qinghua Sun,Chunmiao Liang,Tianrui Chen,Bing Ji,Rugang Liu,Lei Wang,Min Tang,Yuguo Chen,Cong Wang:
  Early detection of myocardial ischemia in 12-lead ECG using deterministic learning and ensemble learning.107124

Section III:Modelling & Simulation

• 
  Rasmus Kuhr Jensen,Mark Clements,Lars Klingen Gjærde,Lasse Hjort Jakobsen:
  Fitting parametric cure models in R using the packages cuRe and rstpm2.107125

Section II:Biomedical signal and image processing methods

• 
  Hooseok Lee,Heewon Chung,Hoon Ko,Antonino Parisi,Alessandro Busacca,Luca Faes,Riccardo Pernice,Jinseok Lee:
  Adaptive scheduling of acceleration and gyroscope for motion artifact cancelation in photoplethysmography.107126
• 
  Tae Young Park,Ji Hyeok Jeong,Yong An Chung,Sang Hoon Yeo,Hyungmin Kim:
  Application of subject-specific helmets for the study of human visuomotor behavior using transcranial focused ultrasound: a pilot study.107127

Diagnostics and Decision Support

• 
  Yunlong Li,Yang Xu,Zuchang Ma,Yuqi Ye,Lisheng Gao,Yining Sun:
  An XGBoost-based model for assessment of aortic stiffness from wrist photoplethysmogram.107128

Section II:Biomedical signal and image processing methods

• 
  Zhengyong Huang,Sijuan Zou,Guoshuai Wang,Zixiang Chen,Hao Shen,Haiyan Wang,Na Zhang,Lu Zhang,Fan Yang,Haining Wang,Dong Liang,Tianye Niu,Xiaohua Zhu,Zhanli Hu:
  ISA-Net: Improved spatial attention network for PET-CT tumor segmentation.107129

Section IV:Classification and interpretation

• 
  Hongwei Chen,Sunang Yan,Mingxing Xie,Jianlong Huang:
  Application of cascaded GAN based on CT scan in the diagnosis of aortic dissection.107130

Section II:Biomedical signal and image processing methods

• 
  Mohammad Bagher Khodabakhshi,Naeem Eslamyeh,Seyede Zohreh Sadredini,Mohammad Ghamari:
  Cuffless blood pressure estimation using chaotic features of photoplethysmograms and parallel convolutional neural network.107131
• 
  Alice Othmani,Assaad Oussama Zeghina,Muhammad Muzammel:
  A Model of Normality Inspired Deep Learning Framework for Depression Relapse Prediction Using Audiovisual Data.107132
• 
  Quoc Cuong Ngo,Mohammod Abdul Motin,Nemuel Daniel Pah,Peter Drotár,Peter Kempster,Dinesh K. Kumar:
  Computerized analysis of speech and voice for Parkinson's disease: A systematic review.107133

Section III:Modelling & Simulation

• 
  Faezeh Moshfeghifar,Torkan Gholamalizadeh,Zachary Ferguson,Teseo Schneider,Michael Bachmann Nielsen,Daniele Panozzo,Sune Darkner,Kenny Erleben:
  LibHip: An open-access hip joint model repository suitable for finite element method simulation.107140

Section II:Biomedical signal and image processing methods

• 
  Gabriel Iluebe Okolo,Stamos Katsigiannis,Naeem Ramzan:
  IEViT: An enhanced vision transformer architecture for chest X-ray image classification.107141

Section III:Modelling & Simulation

• 
  Shaoyang Bi,Ziyuan Guo,Xizhong Zhang,Guangyu Shi:
  Anchorage effects of ligation and direct occlusion in orthodontics: A finite element analysis.107142

Section V:Others

• 
  Christopher Yew Shuen Ang,Jay Wing Wai Lee,Yeong Shiong Chiew,Xin Wang,Chee Pin Tan,Matthew E. Cove,Mohd Basri Mat Nor,Cong Zhou,Thomas Desaive,J. Geoffrey Chase:
  Virtual patient framework for the testing of mechanical ventilation airway pressure and flow settings protocol.107146

Section II:Biomedical signal and image processing methods

• 
  Ping Xuan,Bin Jiang,Hui Cui,Qiangguo Jin,Peng Cheng,Toshiya Nakaguchi,Tiangang Zhang,Changyang Li,Zhiyu Ning,Menghan Guo,Linlin Wang:
  Convolutional bi-directional learning and spatial enhanced attentions for lung tumor segmentation.107147

Section III:Modelling & Simulation

• 
  Fernando Escobar,Julio Gomis-Tena,Javier Saiz,Lucía Romero:
  Automatic modeling of dynamic drug-hERG channel interactions using three voltage protocols and machine learning techniques: A simulation study.107148
• 
  Jingheng Shu,Annan Li,Bingmei Shao,Desmond Y. R. Chong,Jie Yao,Zhan Liu:
  Descriptions of the dynamic joint space of the temporomandibular joint.107149

Section II:Biomedical signal and image processing methods

• 
  Jiechao Wang,Qinqin Yang,Qizhi Yang,Lina Xu,Congbo Cai,Shuhui Cai:
  Joint optimization of Cartesian sampling patterns and reconstruction for single-contrast and multi-contrast fast magnetic resonance imaging.107150

Section IV:Classification and interpretation

• 
  Maoneng Hu,Zichen Wang,Xinxin Hu,Yi Wang,Guoliang Wang,Huanhuan Ding,Mingmin Bian:
  High-resolution computed tomography diagnosis of pneumoconiosis complicated with pulmonary tuberculosis based on cascading deep supervision U-Net.107151

Section III:Modelling & Simulation

• 
  Harnoor Saini,Oliver Röhrle:
  A biophysically guided constitutive law of the musculotendon-complex: modelling and numerical implementation in Abaqus.107152
• 
  Nicole Hobbs,Sediqeh Samadi,Mudassir M. Rashid,Andrew Shahidehpour,Mohammad-Reza Askari,Min-Sun Park,Laurie Quinn,Ali Cinar:
  A physical activity-intensity driven glycemic model for type 1 diabetes.107153
• 
  Alp Karakoç,Arttu Miettinen,Emrah Sözümert,Llion Evans,Hüseyin Yigitler,Basak Bostanci,Ertugrul Taciroglu,Riku Jäntti:
  Microstructural evaluation and recommendations for face masks in community use to reduce the transmission of respiratory infectious diseases.107154

Section II:Biomedical signal and image processing methods

• 
  Gabriele Varisco,Zheng Peng,Deedee Kommers,Zhuozhao Zhan,Ward Cottaar,Peter Andriessen,Xi Long,Carola van Pul:
  Central apnea detection in premature infants using machine learning.107155

Section III:Modelling & Simulation

• 
  N. Naresh Kumar,D. R. V. S. R. K. Sastry,Sachin Shaw:
  Irreversibility analysis of an unsteady micropolar CNT-blood nanofluid flow through a squeezing channel with activation energy-Application in drug delivery.107156

Diagnostics and Decision Support

• 
  Amish Kumar,Palash Ghosal,Soumya Snigdha Kundu,Amritendu Mukherjee,Debashis Nandi:
  A lightweight asymmetric U-Net framework for acute ischemic stroke lesion segmentation in CT and CTP images.107157

Section V:Others

• 
  Dragana Seklic,Tijana Dukic,Dejan A. Milenkovic,Milena Jovanovic,Marko N. Zivanovic,Zoran Markovic,Nenad Filipovic:
  Numerical modelling of WNT/β-catenin signal pathway in characterization of EMT of colorectal carcinoma cell lines after treatment with Pt(IV) complexes.107158
• 
  Seungho Jeon,Chobyeol Shin,Eunnarae Ko,Jongsub Moon:
  A security scheme for distributing analysis codes supporting CDM-based research in a multi-center environment.107159

Section II:Biomedical signal and image processing methods

• 
  Lizhu Liu,Yexin Liu,Jian Zhou,Cheng Guo,Huigao Duan:
  A novel MCF-Net: Multi-level context fusion network for 2D medical image segmentation.107160

Section IV:Classification and interpretation

• 
  Hui Wen Loh,Chui Ping Ooi,Silvia Seoni,Prabal Datta Barua,Filippo Molinari,U. Rajendra Acharya:
  Application of explainable artificial intelligence for healthcare: A systematic review of the last decade (2011-2022).107161

Section II:Biomedical signal and image processing methods

• 
  Rui Liu,Wei Dai,Tianyi Wu,Min Wang,Song Wan,Jun Liu:
  AIMIC: Deep Learning for Microscopic Image Classification.107162
• 
  Keisuke Edanami,Masaki Kurosawa,Hoang Thi Yen,Takeru Kanazawa,Yoshifusa Abe,Tetsuo Kirimoto,Yu Yao,Takemi Matsui,Guanghao Sun:
  Remote sensing of vital signs by medical radar time-series signal using cardiac peak extraction and adaptive peak detection algorithm: Performance validation on healthy adults and application to neonatal monitoring at an NICU.107163

Section III:Modelling & Simulation

• 
  Konstantinos A. Mountris,Esther Pueyo:
  A meshless fragile points method for rule-based definition of myocardial fiber orientation.107164

Section II:Biomedical signal and image processing methods

• 
  Seung-wan Jeong,Hwan-ho Cho,Seunghak Lee,Hyunjin Park:
  Robust multimodal fusion network using adversarial learning for brain tumor grading.107165
• 
  Shenyi Qian,Kunpeng Ren,Weiwei Zhang,Haohan Ning:
  Skin lesion classification using CNNs with grouping of multi-scale attention and class-specific loss weighting.107166
• 
  Ziyu Shu,Alireza Entezari:
  Sparse-view and limited-angle CT reconstruction with untrained networks and deep image prior.107167
• 
  Pengcheng Zhang,Kunpeng Li:
  A dual-domain neural network based on sinogram synthesis for sparse-view CT reconstruction.107168

Section III:Modelling & Simulation

• 
  Yuyao Wu,Fei Wang,Yanbin Shi,Guimei Lin,Jinwei Qiao,Li Wang:
  Molecular dynamics simulation of hyaluronic acid hydrogels: Effect of water content on mechanical and tribological properties.107169

Section II:Biomedical signal and image processing methods

• 
  Qi Lin,Yuli Zhou,Siyuan Shi,Yujuan Zhang,Shaoli Yin,Xuye Liu,Qihui Peng,Shaoting Huang,Yitao Jiang,Chen Cui,Ruilian She,Jinfeng Xu,Fajin Dong:
  How much can AI see in early pregnancy: A multi-center study of fetus head characterization in week 10-14 in ultrasound using deep learning.107170

Section V:Others

• 
  Kian Esmailian,Babak Mohammadzadeh Asl:
  Correlation-based modified delay-multiply-and-sum beamforming applied to medical ultrasound imaging.107171
• 
  Halimu N. Haliduola,Frank Bretz,Ulrich Mansmann:
  Missing data imputation using utility-based regression and sampling approaches.107172

Section II:Biomedical signal and image processing methods

• 
  Marek Wodzinski,Mateusz Daniol,Miroslaw Socha,Daria Hemmerling,Maciej Stanuch,Andrzej Skalski:
  Deep learning-based framework for automatic cranial defect reconstruction and implant modeling.107173

Section III:Modelling & Simulation

• 
  Valentina Mazzi,Giuseppe De Nisco,Karol Calò,Claudio Chiastra,Joost Daemen,David A. Steinman,Jolanda J. Wentzel,Umberto Morbiducci,Diego Gallo:
  Divergence of the normalized wall shear stress as an effective computational template of low-density lipoprotein polarization at the arterial blood-vessel wall interface.107174

Diagnostics and Decision Support

• 
  Jiebin Chu,Yaoyun Zhang,Fei Huang,Luo Si,Songfang Huang,Zhengxing Huang:
  Disentangled representation for sequential treatment effect estimation.107175

Section II:Biomedical signal and image processing methods

• 
  Cong Zhou,J. Geoffrey Chase:
  Low-cost structured light imaging of regional volume changes for use in assessing mechanical ventilation.107176
• 
  José Negrillo-Cárdenas,Juan-Roberto Jiménez-Pérez,Hermenegildo Cañada-Oya,Francisco R. Feito,Alberto D. Delgado-Martínez:
  Hybrid curvature-geometrical detection of landmarks for the automatic analysis of the reduction of supracondylar fractures of the femur.107177

Section III:Modelling & Simulation

• 
  Qimei Gong,Luo Huang,Junpan Luo,Yuejiao Zhang,Qingzhen Meng,Jingjing Quan,Zhongchun Tong:
  The practicability of different preparation of mandibular molar restored by modified endocrown with intracanal extension: Computational analysis using finite element models.107178
• 
  You-Cheng Yu,Tang-Chuan Wang,Tzu-Ching Shih:
  A comprehensive finite-element human ear model to estimate noise-induced hearing loss associated with occupational noise exposure.107179

Section V:Others

• 
  Savitesh Kushwaha,Rachana Srivastava,Rachita Jain,Vivek Sagar,Arun Kumar Aggarwal,Sanjay Kumar Bhadada,Poonam Khanna:
  Harnessing machine learning models for non-invasive pre-diabetes screening in children and adolescents.107180

Section II:Biomedical signal and image processing methods

• 
  Yimin Li,Shuo Han,Yuqing Zhao,Fangzhi Li,Dongjiang Ji,Xinyan Zhao,Dayong Liu,Jianbo Jian,Chunhong Hu:
  Synchrotron microtomography image restoration via regularization representation and deep CNN prior.107181
• 
  Zhou Xu,Fei Yu,Bo Zhang,Qi Zhang:
  Intelligent diagnosis of left ventricular hypertrophy using transthoracic echocardiography videos.107182

Diagnostics and Decision Support

• 
  Chyh-Ming Lai,Chun-Chih Chiu,Yuh-Chuan Shih,Hsin-Ping Huang:
  A hybrid feature selection algorithm using simplified swarm optimization for body fat prediction.107183

Section IV:Classification and interpretation

• 
  Hongyuan Huang,Zhijiao You,Huayu Cai,Jianfeng Xu,Dongxu Lin:
  Fast detection method for prostate cancer cells based on an integrated ResNet50 and YoloV5 framework.107184

Section III:Modelling & Simulation

• 
  Roberto Montes-Robles,Hazael Montanaro,Myles H. Capstick,Javier Ibáñez Civera,Rafael Masot Peris,Eduardo García-Breijo,Nicolás Laguarda-Miró,Ramón Martínez-Máñez:
  Tailored cancer therapy by magnetic nanoparticle hyperthermia: A virtual scenario simulation method.107185
• 
  Zhongzhi Jia,Junhao Mei,Wei Ding,Xi Zhao,Wen Gong,Haiyang Yu,Lihao Qin,Zeyu Piao,Wenhua Chen,Liming Tang:
  The pathogenesis of superior mesenteric artery dissection: An in-depth study based on fluid-structure interaction and histology analysis.107187

Section V:Others

• 
  Ruiqi Feng,Li Zhuo,Xiaoguang Li,Hongxia Yin,Zhenchang Wang:
  BLA-Net: Boundary learning assisted network for skin lesion segmentation.107190

Section III:Modelling & Simulation

• 
  Beichuan Tang,Jiemeng Yang,Yingying Zhang,Xianjun Ren,Tao Jiang,Zhongjun Mo,Yubo Fan:
  Incorporating strategy in hybrid surgery for continuous two-level cervical spondylosis from a biomechanical perspective.107193
• 
  Wei Qu,Xiaofan Li,Hao Huang,Chiyu Xie,Hongqing Song:
  Mechanisms of the ascites volume differences between patients receiving a left or right hemi-liver graft liver transplantation: From biofluidic analysis.107196

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