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• affiliation:Shanghai Jiao Tong University, School of Medicine, China

• Jian Zhang(aka: Ji'an Zhang) —disambiguation page
• Jian Zhang0001 — Chinese Academy of Science, Institute of Software, China
• Jian Zhang0002 —University of Technology, Sydney, Faculty of Engineering and Information Technology, Ultimo, NSW, Australia(and 4 more)
• Jian Zhang0003 —Purdue University, Department of Statistics, West Lafayette, IN, USA(and 2 more)
• Jian Zhang0004 —Louisiana State University, Department of Computer Science, Baton Rouge, LA, USA(and 3 more)
• Jian Zhang0005 —Microsoft Corp., Redmond, WA, USA(and 1 more)
• Jian Zhang0006 — Drexel University, Philadelphia, PA, USA
• Jian Zhang0007 — Tulane University, New Orleans, USA
• Jian Zhang0008 — The University of York, Department of Mathematics, UK
• Jian Zhang0009 — East China University of Science and Technology, China

• Jian Zhang0010 — Wuhan University, School of Computer Science, Wuhan, China
• Jian Zhang0011 — Southeast University, School of Transportation, Jiangsu Key Laboratory of Urban ITS, Nanjing, China
• Jian Zhang0012 — Huazhong Agricultural University, College of Resource and Environment, Wuhan, China
• Jian Zhang0013 — Zhejiang University, College of Electrical Engineering, Hangzhou, China
• Jian Zhang0014 —McGill University, Montreal, QC, Canada(and 1 more)
• Jian Zhang0015 — Chongqing University, College of Communication Engineering, China
• Jian Zhang0016 — City University of Hong Kong, Department of System Engineering and Engineering Management, Hong Kong
• Jian Zhang0017 — Chinese Academy of Sciences, Beijing Institute of Genomics, Key Laboratory of Genomics and Precision Medicine, China
• Jian Zhang0018 —Peking University, School of Electronic and Computer Engineering, Shenzhen Graduate School, Shenzhen, China(and 3 more)
• Jian Zhang0019 —China University of Mining and Technology, School of Computer Science and Technology, Xuzhou, China(and 1 more)
• Jian Zhang0020 —Xinyang Normal University, School of Computer and Information Technology, China(and 2 more)
• Jian Zhang0021 — Jilin University, College of Instrumentation and Electrical Engineering, Changchun, China
• Jian Zhang0022 — National University of Defense Technology, College of Computer, Changsha, China
• Jian Zhang0023 —Hangzhou Dianzi University, School of Cyberspace, China(and 1 more)
• Jian Zhang0024 — Nanjing University, Collaborative Innovation Center of Advanced Microstructures, School of Physics, National Laboratory of Solid State Microstructures, China
• Jian Zhang0025 —Huaihai Institute of Technology, Department of Computer Engineering, Lianyungang, China(and 1 more)
• Jian Zhang0026 —Hangzhou Normal University, School of Information Science and Technology, China(and 3 more)
• Jian Zhang0027 — Hebei Polytechnic University, College of Information, Tangshan, China
• Jian Zhang0028 — Auburn University, RFID Laboratory, AL, USA
• Jian Zhang0029 — Arizona State University, Tempe, USA
• Jian Zhang0030 — University of Technology of Troyes, France
• Jian Zhang0031 — University of Darmstadt, Germany
• Jian Zhang0032 — Peking University, Institute of Computer Science and Technology, Beijing, China
• Jian Zhang0033 — Xidian University, State Key Laboratory of Integrated Service Networks, Xi'an, China
• Jian Zhang0034 — Central South University, School of Resources and Safety Engineering, Changsha, China
• Jian Zhang0035 —Zhejiang University, School of Mathematical Sciences, Hangzhou, China(and 1 more)
• Jian Zhang0036 — Texas Woman's University, Denton, TX, USA
• Jian Zhang0038 — National Institutes of Health, Bethesda, MD, USA
• Jian Zhang0039 — North China Electric Power University, State Key Laboratory of Alternate Electrical Power System With Renewable Energy Sources, Beijing, China
• Jian Zhang0040 — National Digital Switching System Engineering and Technological Research Center, Zhengzhou, China
• Jian Zhang0041 — Southeast University, School of Civil Engineering, Jiangsu Key Laboratory of Engineering Mechanics, Nanjing, China
• Jian Zhang0042 — École centrale de Lille, Villeneuve-d'Ascq, France
• Jian Zhang0043 — Southwest Jiaotong University, School of Mechanical Engineering, Chengdu, China
• Jian Zhang0044 —Harbin Engineering University, College of Power and Energy Engineering, China(and 1 more)
• Jian Zhang0045 — University of Technology of Belfort-Montbéliard, Belfort, France
• Jian Zhang0046 — Space Engineering University, PLA Strategic Support Force, Beijing, China
• Jian Zhang0047 — Beijing University of Posts and Telecommunications, School of Information and Communication Engineering, China
• Jian Zhang0048 — Central South University, School of Computer Science and Engineering, Changsha, China
• Jian Zhang0049 —Stanford University, Department of Computer Science, Stanford, CA, USA(and 2 more)
• Jian Zhang0050 —Apple Inc., Cupertino, CA, USA(and 1 more)
• Jian Zhang0051 — Georgetown University Medical Center, Washington, DC, USA
• Jian Zhang0052 —Hunan University of Commerce, School of Mathematics and Statistics, Key Laboratory of Hunan Province for Mobile Business Intelligence, Changsha, China(and 1 more)
• Jian Zhang0053 — South China University of Technology, School of Electric Power Engineering, Guangzhou, China
• Jian Zhang0054 — Nanjing University of Information Science and Technology, School of Computer and Software, Nanjing, China
• Jian Zhang0055 — Tongji University, School of Mechanical Engineering, Shanghai, China
• Jian Zhang0056 — Sichuan Normal University, School of Physics and Electronic Engineering, Chengdu, China
• Jian Zhang0057 — Central University of Finance and Economics, School of Government, Beijing, China
• Jian Zhang0058 — Nanjing University of Aeronautics and Astronautics, College of Automation Engineering, Center for More-Electric-Aircraft Power System, Nanjing, China
• Jian Zhang0059 — Beijing University of Posts and Telecommunications, National Engineering Lab for Mobile Network Technologies, Beijing, China
• Jian Zhang0060 — East China Normal University, Shanghai Key Laboratory of Multidimensional Information Processing, Shanghai, China
• Justin Jian Zhang(aka: Jian Zhang0061) —Dongguan University of Technology, Engineering Technology Institute, Dongguan, China(and 1 more)
• Jian Zhang0062 —Jiangsu University, Department of Mechanics and Engineering Science, Zhenjiang, China(and 1 more)
• Jian Zhang0063 — University of Kent, School of Mathematics, Statistics and Actuarial Science, Canterbury, UK
• Jian Zhang0064 —Zhengzhou University, School of Mathematics and Statistics, Zhengzhou, China(and 1 more)
• Jian Zhang0065 — Sichuan Normal University, College of Mathematics and Software Science, Chengdu, China
• Jian Zhang0066 — Rutgers University, Department of Electrical and Computer Engineering, Piscataway, NJ, USA
• Jian Zhang0067 — EPFL, Integrated Systems Laboratory, Lausanne, Switzerland
• Jian Zhang0068 — Tianjin University of Technology, School of Computer Science and Engineering, Tianjin Key Laboratory of Intelligence Computing and Novel Software Technology, Tianjin, China
• Jian Zhang0069 —Broadcom Corp., San Diego, CA, USA(and 1 more)
• Jian Zhang0070 —Chinese Academy of Sciences, Computer Network Information Center, Beijing, China(and 2 more)
• Jian Zhang0071 — Delft University of Technology, Department of Precision & Microsystems Engineering, Delft, Netherlands
• Jian Zhang0072 — University of Jyväskylä Department of Mathematical Information Technology, Jyväskylä, Finland
• Jian Zhang0073 — University of Rostock, Institute of Automation, Rostock, Germany
• Jian Zhang0074 — Columbia University, Department of Mechanical Engineering, New York, NY, USA
• Jian Zhang0075 —University of Science and Technology of China, Hefei, China(and 1 more)
• Jian Zhang0076 — Waseda University, Graduate School of Information, Production and Systems, Tokyo, Japan
• Jian Zhang0077 — Ohio State University, Department of Statistics, Columbus, OH, USA
• Jian Zhang0078 —SUNY Downstate Medical Center, Henri Begleiter Neurodynamics Laboratory, Brooklyn, NY, USA(and 1 more)
• Jian Zhang0079 —Shanghai Jiao Tong University, Shanghai Institute for Advanced Communication and Data Science, China(and 1 more)
• Jian Zhang0080 — Beijing Information Science and Technology University, School of Economics and Management, China
• Jian Zhang0081 —Southwest Jiaotong University, Faculty of Geosciences and Environmental Engineering, Chengdu, China(and 1 more)

• 2025
• 
  [i3]
  Binjian Wu,Qian Li,Zhe Kuang,Hongyuan Gao,Xinyi Liu,Haiyan Guo,Qiuju Chen,Xinyi Liu,Yangruizhe Jiang,Yuqi Zhang,Jinyin Zha,Mingyu Li,Qiuhan Ren,Sishuo Feng,Haicang Zhang,Xuefeng Lu,Jian Zhang:
  ILETIA: An AI-enhanced method for individualized trigger-oocyte pickup interval estimation of progestin-primed ovarian stimulation protocol.CoRRabs/2501.16386 (2025)
• 2024
• 
  [j31]
  Qian Li,Zhijie Hu,Jiayin He,Xinyi Liu,Yini Liu,Jiale Wei,Binjian Wu,Xun Lu,Hongxi He,Yuqi Zhang,Jixiao He,Mingyu Li,Chengwei Wu,Lijun Lv,Yang Wang,Linxuan Zhou,Quan Zhang,Jian Zhang,Xiaoyue Cheng,Hongfang Shao,Xuefeng Lu:
  Deciphering the comprehensive knowledgebase landscape featuring infertility with IDDB Xtra.Comput. Biol. Medicine170:108105 (2024)
• 
  [i2]
  Shaoning Li,Yusong Wang,Mingyu Li,Jian Zhang,Bin Shao,Nanning Zheng,Jian Tang:
  F³low: Frame-to-Frame Coarse-grained Molecular Dynamics with SE(3) Guided Flow Matching.CoRRabs/2405.00751 (2024)
• 
  [i1]
  Shaoning Li,Mingyu Li,Yusong Wang,Xinheng He,Nanning Zheng,Jian Zhang,Pheng-Ann Heng:
  Improving AlphaFlow for Efficient Protein Ensembles Generation.CoRRabs/2407.12053 (2024)
• 2023
• 
  [j30]
  Xiaokun Hong,Ningshan Li,Jiyang Lv,Yan Zhang,Jing Li,Jian Zhang,Hai-Feng Chen:
  PTMint database of experimentally verified PTM regulation on protein-protein interaction.Bioinform.39(1) (2023)
• 
  [j29]
  Xiaoyue Ji,Xiaochen Cui,Zhengxin Li,Taeyoung Choi,Ying Wang,Wen Xiao,Yunshuo Zhao,Jinyin Zha,Jian Zhang,Hai-Feng Chen,Zhengtian Yu:
  Research and Evaluation of the Allosteric Protein-Specific Force Field Based on a Pre-Training Deep Learning Model.J. Chem. Inf. Model.63(8):2456-2468 (2023)
• 
  [j28]
  Jinyin Zha,Qian Li,Xinyi Liu,Weidong Lin,Tingting Wang,Jiacheng Wei,Ziliang Zhang,Xun Lu,Jing Wu,Duan Ni,Kun Song,Liang Zhang,Xuefeng Lu,Shaoyong Lu,Jian Zhang:
  AlloReverse: multiscale understanding among hierarchical allosteric regulations.Nucleic Acids Res.51(W1):33-38 (2023)
• 
  [j27]
  Qianqian Song,Mingyu Li,Qian Li,Xun Lu,Kun Song,Ziliang Zhang,Jiale Wei,Liang Zhang,Jiacheng Wei,Youqiong Ye,Jinyin Zha,Qiufen Zhang,Qiang Gao,Jiang Long,Xinyi Liu,Xuefeng Lu,Jian Zhang:
  DeepAlloDriver: a deep learning-based strategy to predict cancer driver mutations.Nucleic Acids Res.51(W1):129-133 (2023)
• 2022
• 
  [j26]
  Hao Zhang,Duan Ni,Jigang Fan,Minyu Li,Jian Zhang,Chen Hua,Ruth Nussinov,Shaoyong Lu:
  Markov State Models and Molecular Dynamics Simulations Reveal the Conformational Transition of the Intrinsically Disordered Hypervariable Region of K-Ras4B to the Ordered Conformation.J. Chem. Inf. Model.62(17):4222-4231 (2022)
• 2021
• 
  [j25]
  Junxi Mu,Hao Liu,Jian Zhang,Ray Luo,Hai-Feng Chen:
  Recent Force Field Strategies for Intrinsically Disordered Proteins.J. Chem. Inf. Model.61(3):1037-1047 (2021)
• 
  [j24]
  Jing Wu,Danjun Li,Xinyi Liu,Qian Li,Xinheng He,Jiale Wei,Xinyi Li,Mingyu Li,Ashfaq Ur Rehman,Yujia Xia,Chengwei Wu,Jian Zhang,Xuefeng Lu:
  IDDB: a comprehensive resource featuring genes, variants and characteristics associated with infertility.Nucleic Acids Res.49(Database-Issue):D1218-D1232 (2021)
• 2020
• 
  [j23]
  Xinyi Liu,Shaoyong Lu,Kun Song,Qiancheng Shen,Duan Ni,Qian Li,Xinheng He,Hao Zhang,Qi Wang,Yingyi Chen,Xinyi Li,Jing Wu,Chunquan Sheng,Guoqiang Chen,Yaqin Liu,Xuefeng Lu,Jian Zhang:
  Unraveling allosteric landscapes of allosterome with ASD.Nucleic Acids Res.48(Database-Issue):D394-D401 (2020)

• 2019
• 
  [j22]
  Xiaoli An,Shaoyong Lu,Kun Song,Qiancheng Shen,Meilan Huang,Xiaojun Yao,Huanxiang Liu,Jian Zhang:
  Are the Apo Proteins Suitable for the Rational Discovery of Allosteric Drugs?J. Chem. Inf. Model.59(1):597-604 (2019)
• 
  [j21]
  Ren Kong,Feng Wang,Jian Zhang,Fengfei Wang,Shan Chang:
  CoDockPP: A Multistage Approach for Global and Site-Specific Protein-Protein Docking.J. Chem. Inf. Model.59(8):3556-3564 (2019)
• 
  [j20]
  Kun Song,Qian Li,Wei Gao,Shaoyong Lu,Qiancheng Shen,Xinyi Liu,Yongyan Wu,Binquan Wang,Houwen Lin,Guoqiang Chen,Jian Zhang:
  AlloDriver: a method for the identification and analysis of cancer driver targets.Nucleic Acids Res.47(Webserver-Issue):W315-W321 (2019)
• 2018
• 
  [j19]
  Min Huang,Kun Song,Xinyi Liu,Shaoyong Lu,Qiancheng Shen,Renxiao Wang,Jingze Gao,Yuanyuan Hong,Qian Li,Duan Ni,Jianrong Xu,Guoqiang Chen,Jian Zhang:
  AlloFinder: a strategy for allosteric modulator discovery and allosterome analyses.Nucleic Acids Res.46(Webserver-Issue):W451-W458 (2018)
• 2017
• 
  [j18]
  Kun Song,Xinyi Liu,Wenkang Huang,Shaoyong Lu,Qiancheng Shen,Lu Zhang,Jian Zhang:
  Improved Method for the Identification and Validation of Allosteric Sites.J. Chem. Inf. Model.57(9):2358-2363 (2017)
• 2016
• 
  [j17]
  Luis N. Marenco,Rixin Wang,Robert A. McDougal,Tsviya Olender,Michal Twik,Elspeth A. Bruford,Xinyi Liu,Jian Zhang,Doron Lancet,Gordon M. Shepherd,Chiquito J. Crasto:
  ORDB, HORDE, ODORactor and other on-line knowledge resources of olfactory receptor-odorant interactions.Database J. Biol. Databases Curation2016 (2016)
• 
  [j16]
  Shuai Li,Qiancheng Shen,Minyi Su,Xinyi Liu,Shaoyong Lu,Zhongjie Chen,Renxiao Wang,Jian Zhang:
  Alloscore: a method for predicting allosteric ligand-protein interactions.Bioinform.32(10):1574-1576 (2016)
• 
  [j15]
  Qiancheng Shen,Guanqiao Wang,Shuai Li,Xinyi Liu,Shaoyong Lu,Zhongjie Chen,Kun Song,Junhao Yan,Lv Geng,Zhimin Huang,Wenkang Huang,Guoqiang Chen,Jian Zhang:
  ASD v3.0: unraveling allosteric regulation with structural mechanisms and biological networks.Nucleic Acids Res.44(Database-Issue):527-535 (2016)
• 2015
• 
  [j14]
  Wenkang Huang,Guanqiao Wang,Qiancheng Shen,Xinyi Liu,Shaoyong Lu,Lv Geng,Zhimin Huang,Jian Zhang:
  ASBench: benchmarking sets for allosteric discovery.Bioinform.31(15):2598-2600 (2015)
• 2014
• 
  [j13]
  Qian Zhang,Wei Zhang,Youyong Li,Junmei Wang,Jian Zhang,Tingjun Hou:
  MORT: a powerful foundational library for computational biology and CADD.J. Cheminformatics6(1):36 (2014)
• 
  [j12]
  Zhimin Huang,Linkai Mou,Qiancheng Shen,Shaoyong Lu,Chuangang Li,Xinyi Liu,Guanqiao Wang,Shuai Li,Lv Geng,Yaqin Liu,Jiawei Wu,Guoqiang Chen,Jian Zhang:
  ASD v2.0: updated content and novel features focusing on allosteric regulation.Nucleic Acids Res.42(Database-Issue):510-516 (2014)
• 
  [j11]
  Shaoyong Lu,Wenkang Huang,Qi Wang,Qiancheng Shen,Shuai Li,Ruth Nussinov,Jian Zhang:
  The Structural Basis of ATP as an Allosteric Modulator.PLoS Comput. Biol.10(9) (2014)
• 2013
• 
  [j10]
  Wenkang Huang,Shaoyong Lu,Zhimin Huang,Xinyi Liu,Linkai Mou,Yu Luo,Yanlong Zhao,Yaqin Liu,Zhongjie Chen,Tingjun Hou,Jian Zhang:
  Allosite: a method for predicting allosteric sites.Bioinform.29(18):2357-2359 (2013)
• 
  [j9]
  Xuben Hou,Jintong Du,Jian Zhang,Lupei Du,Hao Fang,Minyong Li:
  How to Improve Docking Accuracy of AutoDock4.2: A Case Study Using Different Electrostatic Potentials.J. Chem. Inf. Model.53(1):188-200 (2013)
• 
  [j8]
  Ting Shi,Yuhui Han,Weihua Li,Yanlong Zhao,Yaqin Liu,Zhimin Huang,Shaoyong Lu,Jian Zhang:
  Exploring the Desumoylation Process of SENP1: A Study Combined MD Simulations with QM/MM Calculations on SENP1-SUMO1-RanGAP1.J. Chem. Inf. Model.53(9):2360-2368 (2013)
• 2012
• 
  [j7]
  Shaoyong Lu,Wenkang Huang,Xiaobai Li,Zhimin Huang,Xinyi Liu,Yingyi Chen,Ting Shi,Jian Zhang:
  Insights into the Role of Magnesium Triad inmyo-Inositol Monophosphatase: Metal Mechanism, Substrate Binding, and Lithium Therapy.J. Chem. Inf. Model.52(9):2398-2409 (2012)
• 
  [j6]
  Weihua Li,Jing Fu,Feixiong Cheng,Mingyue Zheng,Jian Zhang,Guixia Liu,Yun Tang:
  Unbinding Pathways of GW4064 from Human Farnesoid X Receptor As Revealed by Molecular Dynamics Simulations.J. Chem. Inf. Model.52(11):3043-3052 (2012)
• 2011
• 
  [j5]
  Xinyi Liu,Xubo Su,Fei Wang,Zhimin Huang,Qi Wang,Zhen Li,Ruina Zhang,Lifang Wu,Yi Pan,Yingyi Chen,Hanyi Zhuang,Guoqiang Chen,Ting Shi,Jian Zhang:
  ODORactor: a web server for deciphering olfactory coding.Bioinform.27(16):2302-2303 (2011)
• 
  [j4]
  Fei Wang,DongXiang Liu,Heyao Wang,Cheng Luo,Mingyue Zheng,Hong Liu,Weiliang Zhu,Xiaomin Luo,Jian Zhang,Hualiang Jiang:
  Computational Screening for Active Compounds Targeting Protein Sequences: Methodology and Experimental Validation.J. Chem. Inf. Model.51(11):2821-2828 (2011)
• 
  [j3]
  Zhimin Huang,Liang Zhu,Yan Cao,Geng Wu,Xinyi Liu,Yingyi Chen,Qi Wang,Ting Shi,Yaxue Zhao,Yuefei Wang,Weihua Li,Yixue Li,Haifeng Chen,Guoqiang Chen,Jian Zhang:
  ASD: a comprehensive database of allosteric proteins and modulators.Nucleic Acids Res.39(Database-Issue):663-669 (2011)
• 2010
• 
  [j2]
  Wei Cui,Zhuo Wei,Quan Chen,Yuanhua Cheng,Lingling Geng,Jian Zhang,Jianhua Chen,Tingjun Hou,Mingjuan Ji:
  Structure-Based Design of Peptides against G3BP with Cytotoxicity on Tumor Cells.J. Chem. Inf. Model.50(3):380-387 (2010)
• 
  [j1]
  Yaxue Zhao,Xuefeng Lu,Chao-Yie Yang,Zhimin Huang,Wei Fu,Tingjun Hou,Jian Zhang:
  Computational Modeling Toward Understanding Agonist Binding on Dopamine 3.J. Chem. Inf. Model.50(9):1633-1643 (2010)

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