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File:OrthoMaM v10b 2019 116genera circular tree.svg

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English

Genus-level molecular phylogeny of 116 mammals inferred from the gene tree information of 14,509 coding DNA sequences of the OrthoMaM database.

Summary

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DescriptionOrthoMaM v10b 2019 116genera circular tree.svg

English: The phylogenetic tree is from theOrthoMaM v10b database.

The major clades are colored: monotremes (black), marsupials (magenta), xenarthrans (orange), afrotherians (red), laurasiatherians (green), and euarchontoglires (blue).

All mammalian icons are from Wikimedia Commons, clockwise from the platypus:

Ornithorhynchus|https://commons.wikimedia.org/wiki/File:Brehms_Tierleben._Allgemeine_kunde_des_Tierreichs_(1911)_(20413855495)_white_background.jpg
Monodelphis domestica|https://commons.wikimedia.org/wiki/File:Monodelphis_domestica93-300b.jpg
Macropus robustus|https://commons.wikimedia.org/wiki/File:Macropus_hagenbecki_1907.jpg
Phascolarctos cinereus|https://commons.wikimedia.org/wiki/File:Koala_at_Birdland_Animal_Park.JPG
Dasypus novemcinctus|https://commons.wikimedia.org/wiki/File:Dasypus_novemcinctus_-_MUSE.jpg
Choloepus didactylus|https://commons.wikimedia.org/wiki/File:Choloepus_didactylus_-_MUSE.JPG
Trichechus manatus|https://commons.wikimedia.org/wiki/File:Underwater_photography_on_endangered_mammal_manatee.jpg
Loxodonta africana|https://commons.wikimedia.org/wiki/File:Elephant_white_background.png
Elephantulus rupestris|https://commons.wikimedia.org/wiki/File:Elephantulus_rupestris_Smith_1839.tif
Erinaceus europaeus|https://commons.wikimedia.org/wiki/File:Erinaceus_europaeus_h%C3%A9risson_Cuvier_Lasteyrie_BNF_Gallica.jpg
Sorex araneus|https://commons.wikimedia.org/wiki/File:Faune_des_vert%C3%A9br%C3%A9s_de_la_Suisse_(Pl._V)_(7979672109).jpg
Diceros bicornis|https://commons.wikimedia.org/wiki/File:Rhino_white_background.jpg
Equus caballus|https://commons.wikimedia.org/wiki/File:TvN_Anglo-Araber.JPG
Rhinolophus ferrumequinum|https://commons.wikimedia.org/wiki/File:British_mammals_(Pl._1)_BHL48418555.jpg
Myotis bechsteinii|https://commons.wikimedia.org/wiki/File:British_mammals_(Pl._6)_BHL48418496.jpg
Manis crassicaudata|https://commons.wikimedia.org/wiki/File:FMIB_46859_Pangolin_a_grosse_queue_white_background.jpeg
Felis catus|https://commons.wikimedia.org/wiki/File:Anatomie_descriptive_et_comparative_du_chat_(1845)_Pl-I_(white_background_%26_colourised).jpg
Canis lupus|https://commons.wikimedia.org/wiki/File:Yakutian_laika_(white_background).jpg
Ailuropoda melanoleuca|https://commons.wikimedia.org/wiki/File:Pandas!!_(GIANT_PANDA-WOLONG-SICHUAN-CHINA)_(2151393048).jpg
Odobenus spe|https://commons.wikimedia.org/wiki/File:Walrus_animal_male_detailed_photo_white_background.jpg
Camelus bactrianus|https://commons.wikimedia.org/wiki/File:Camel_seitlich_trabend.jpg
Sus scrofa|https://commons.wikimedia.org/wiki/File:Recherches_pour_servir_%C3%A0_l%27histoire_naturelle_des_mammif%C3%A8res_(Pl._80)_(white_background).jpg
Balaenoptera acutorostrata|https://commons.wikimedia.org/wiki/File:Balaenoptera_acutorostrata_NOAA.jpg
Physeter macrocephalus|https://commons.wikimedia.org/wiki/File:EB1911_Sperm-Whale.jpg
Tursiops spe|https://commons.wikimedia.org/wiki/File:Parc_Asterix_20.jpg
Odocoileus virginianus|https://commons.wikimedia.org/wiki/File:The_deer_of_all_lands_(1898)_Virginia_deer_white_background.png
Capra hircus|https://commons.wikimedia.org/wiki/File:Castellet_-_Ch%C3%A8vre.jpg
Bos taurus|https://commons.wikimedia.org/wiki/File:Bos_taurus.003_-_San_Emiliano_(Leon).jpg
Tupaia tana|https://commons.wikimedia.org/wiki/File:Tupaia_tana_J_Smit.jpg
Oryctolagus cuniculus|https://commons.wikimedia.org/wiki/File:Oryctolagus_cuniculus_(AM_LM817).jpg
Ictidomys mexicanus|https://commons.wikimedia.org/wiki/File:Mexican_ground_squirrel_ictidomys_mexicanus.jpg
Heterocephalus glaber|https://commons.wikimedia.org/wiki/File:Naked-Mole-Rat_extracted-on-white-background.jpg
Octodon degus|https://commons.wikimedia.org/wiki/File:Octodon_cumingii_TZSL_white_background.jpg
Castor|https://commons.wikimedia.org/wiki/File:Die_Gartenlaube_(1858)_b_068_white_background.jpg
Jaculus jaculus|https://commons.wikimedia.org/wiki/File:Jaculus_jaculus_-_Leonardo_Hidalgo_Insuasti.jpg
Cricetulus vulgaris|https://commons.wikimedia.org/wiki/File:FMIB_46816_Hamster_ordinaire_white_background.jpeg
Microtus arvalis|https://commons.wikimedia.org/wiki/File:Microtus_arvalis_lenghts.JPG
Rattus norvegicus|https://commons.wikimedia.org/wiki/File:Rattus_norvegicus_(white_background).png
Mus musculus|https://commons.wikimedia.org/wiki/File:%D0%9C%D1%8B%D1%88%D1%8C_2_(cropped).jpg
Cynocephalus volans|https://commons.wikimedia.org/wiki/File:Cynocephalus_volans_Brehm1883_(white_background).jpg
Otolemur garnetti|https://commons.wikimedia.org/wiki/File:GalagoGarnettiiWolf.jpg
Carlito (Tarsius) spe|https://commons.wikimedia.org/wiki/File:S%C3%A4ugethiere_vom_Celebes-_und_Philippinen-Archipel_(Taf._III)_(white_background)_(1).jpg
Saimiri boliviensis|https://commons.wikimedia.org/wiki/File:Saimiri_boliviensis_1847.jpg
Hylobates lar|https://commons.wikimedia.org/wiki/File:Hylobates_variegatus_-_1868_-_Print_-_Iconographia_Zoologica_-_Special_Collections_University_of_Amsterdam_-_UBA01_IZ19800109.tif
Pongo|https://commons.wikimedia.org/wiki/File:OranUtan.jpg
Gorilla gorilla|https://commons.wikimedia.org/wiki/File:Gorila_de_llanura_occidental._Gorilla_gorilla_-_Blanca_Mart%C3%AD_de_Ahumada_(white_background).jpg
Homo sapiens|https://commons.wikimedia.org/wiki/File:Ernst_Wenck_-_Trinkendes_Mädchen.jpg
Pan troglodytes|https://commons.wikimedia.org/wiki/File:PanTroglodytesSmit_(white_background).jpg
Colobus|https://commons.wikimedia.org/wiki/File:Handbook_to_the_Primates_Plate_34.jpg
Chlorocebus sabaeus|https://commons.wikimedia.org/wiki/File:Green_monkey_(Chlorocebus_sabaeus)_male.jpg
Papio papio (ex Cynocephalus sphinx)|https://commons.wikimedia.org/wiki/File:Cynocephalus_sphinx_-_1829-1867_-_Print_-_Iconographia_Zoologica_-_Special_Collections_University_of_Amsterdam_-_(white_background).tif
Mandrillus sphinx|https://commons.wikimedia.org/wiki/File:Mandrillus_white_background.jpg
Macaca mulatta|https://commons.wikimedia.org/wiki/File:Macaca_mulatta_(22886604281).jpg

Date

18 January 2019

Source

Own work

Author

This picture is a work by theOrthoMaM team at the "Institute of Evolutionary Sciences of Montpellier (ISEM)" and at the "University of Montpellier".

Pleasecredit this picture with one of thesereferences.

Original paper -OrthoMaM: A database of orthologous genomic markers for placental mammal phylogenetics. Ranwez V., Delsuc F., Ranwez S., Belkhir K., Tilak M. & Douzery E. J. P.BMC Evolutionary Biology, 2007, 7 : 241.
Database update -OrthoMaM v8: a database of orthologous exons and coding sequences for comparative genomics in mammals. Douzery E. J. P., Scornavacca C., Romiguier J., Belkhir K., Galtier N., Delsuc F. & Ranwez V.Molecular Biology and Evolution, 2014, 31 : 1923-1928.
A major update -OrthoMaM v10: Scaling-up orthologous coding sequence and exon alignments with more than one hundred mammalian genomes. Scornavacca C., Belkhir K., Lopez J., Dernat R., Delsuc F., Douzery E. J. P., & Ranwez V.Molecular Biology and Evolution, 2019, 36 : 861–862.
New database update -OrthoMaM v12: a database of curated single-copy ortholog alignments and trees to study mammalian evolutionary genomics. Allio R., Delsuc F., Belkhir K., Douzery E. J. P., Ranwez V. & Scornavacca C.Nucleic Acids Research, 2024, 52 : D529-D535.

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