gcloud alpha healthcare fhir-stores export bq - export Cloud Healthcare API FHIR resources to BigQuery

gcloud alpha healthcare fhir-stores export bq(FHIR_STORE :--dataset=DATASET--location=LOCATION)--bq-dataset=BQ_DATASET--schema-type=SCHEMA_TYPE[--async][--recursive-depth=RECURSIVE_DEPTH][--resource-type=RESOURCE_TYPE][--since=SINCE][--write-disposition=WRITE_DISPOSITION][GCLOUD_WIDE_FLAG …]

gcloudalphahealthcarefhir-storesexportbqtest-fhir-store--bq-dataset=bq://my-project.bqdataset--dataset=test-dataset

To perform the same export, but with the 'ANALYTICS' schema and the recursivestructure depth of 3, run:

gcloudalphahealthcarefhir-storesexportbqtest-fhir-store--bq-dataset=bq://my-project.bqdataset--dataset=test-dataset--schema-type=analytics--recursive-depth=3

FhirStore resource - Cloud Healthcare API FHIR store to export resources from.The arguments in this group can be used to specify the attributes of thisresource. (NOTE) Some attributes are not given arguments in this group but canbe set in other ways.

To set theproject attribute:

• provide the argumentfhir_store on the command line with a fullyspecified name;
• provide the argument--project on the command line;
• set the propertycore/project.

This must be specified.

FHIR_STORE

ID of the fhirStore or fully qualified identifier for the fhirStore.

To set thefhir_store attribute:

• provide the argumentfhir_store on the command line.

This positional argument must be specified if any of the other arguments in thisgroup are specified.

--dataset=DATASET

Cloud Healthcare dataset.

To set thedataset attribute:

• provide the argumentfhir_store on the command line with a fullyspecified name;
• provide the argument--dataset on the command line.

--location=LOCATION

Google Cloud location.

To set thelocation attribute:

• provide the argumentfhir_store on the command line with a fullyspecified name;
• provide the argument--location on the command line;
• set the propertyhealthcare/location.

--bq-dataset=BQ_DATASET

BigQuery dataset that houses the BigQuery tables.

--schema-type=SCHEMA_TYPE

Specifies the output schema type. If unspecified, the default isLOSSLESS.SCHEMA_TYPE must be one of:

analytics

Analytics schema defined by the FHIR community. Seehttps://github.com/rbrush/sql-on-fhir/blob/master/sql-on-fhir.md.

analytics_v2

Analytics V2, similar to schema defined by the FHIR community, with addedsupport for extensions with one or more occurrences and contained resources instringified JSON.

lossless

Schema generated from original FHIR data.

--async

Return immediately, without waiting for the operation in progress to complete.

--recursive-depth=RECURSIVE_DEPTH

The depth for all recursive structures in the output analytics schema. Forexample, concept in the CodeSystem resource is a recursive structure; when thedepth is 2, the CodeSystem table will have a column called concept.concept butnot concept.concept.concept. If not specified or set to 0, the server will usethe default value 2.

--resource-type=RESOURCE_TYPE

String of comma-delimited FHIR resource types. If provided, only resources ofthe specified resource type(s) are exported.

--since=SINCE

If provided, only resources updated after this time are exported. The time usesthe format YYYY-MM-DDThh:mm:ss.sss+zz:zz. For example,2015-02-07T13:28:17.239+02:00 or2017-01-01T00:00:00Z.The time must be specified to the second and include a time zone.

--write-disposition=WRITE_DISPOSITION

Determines whether existing tables in the destination dataset are overwritten orappended to.WRITE_DISPOSITION must be one of:

write-append

Append data to the existing tables.

write-empty

Only export data if the destination tables are empty.

write-truncate

Erase all existing data in the tables before writing the instances.

Run$gcloud help for details.