Movatterモバイル変換

To reiterate one of GenoMax's questions, is the new sequencing provider making the libraries for you? If so, have they by any chance used r…

I'd recommend reading the [differential abundance testing chapter](https://bioconductor.org/books/3.21/OSCA.multisample/differential-abunda…

They did make a [Tool post originally](https://www.biostars.org/p/9613596), but still phrased it as something they just came across rather …

Agreed, just make a "Tool" post if you want to spread the word about it.People tend to take those much better than these weak attempts at…

Since you have decided to move to a new sequence provider that decision is for economic reasons and not scientific, so not much to think ab…

These are multi-strain VCF's so you could look for SNP's common across the strains (see --> https://www.biostars.org/p/9498113/ ) . Keep in…

>Are you comparing the same exact library sequenced by two different companies.Nah it's just majorty of my old datasets osciliated around…

> Previously on the single-end data from old company I was getting around 50-60% of the uniquely aligned reads Are you comparing the same…

Thank you for your reply! Yeah I thought the same. It feels weird to me that this is not an obvious feature.

Again... "I recently *stumbled* upon a small browser-based tool"On the site: "Created by alba0gf"That's the second time you've linked y…

"i recently *found* this simple tool"Go to site"Created by alba0gf"I mean... why lie?

What do you think you'll gain by doing tumour vs normal at single-cell resolution? The whole point of single cell is to define sub-populati…

My purpose is to count reads mapping to the genomes. Was my code above in doing so correct?

Maybe this will work, minus the flux data.https://www.kegg.jp/kegg/pathway.html

Unless you are able to use "user defined window" with color (as noted in https://art-egorov.github.io/lovis4u/ExampleDrivenGuide/cmd_guide/…