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statTarget
This is thereleased version of statTarget; for the devel version, seestatTarget.
Statistical Analysis of Molecular Profiles
Bioconductor version: Release (3.22)
A streamlined tool provides a graphical user interface for quality control based signal drift correction (QC-RFSC), integration of data from multi-batch MS-based experiments, and the comprehensive statistical analysis in metabolomics and proteomics.
Author: Hemi Luan
Maintainer: Hemi Luan <hemi.luan at gmail.com>
Citation (from within R, enter
citation("statTarget")):Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE)) install.packages("BiocManager")BiocManager::install("statTarget")For older versions of R, please refer to the appropriateBioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("statTarget")| QC_free approach with Combat method | HTML | R Script |
| statTarget2 for pathway analysis | HTML | R Script |
| statTarget2 On using the Graphical User Interface | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | BatchEffect,ComBat,DifferentialExpression,ImmunoOncology,Lipidomics,Machine Learning,MassSpectrometry,Metabolomics,MultipleComparison,Normalization,Preprocessing,Proteomics,QC-RFSC,QualityControl,Software,Visualization |
| Version | 1.40.0 |
| In Bioconductor since | BioC 3.4 (R-3.3) (9 years) |
| License | LGPL (>= 3) |
| Depends | R (>= 3.6.0) |
| Imports | randomForest,plyr,pdist,ROC, utils, grDevices, graphics,rrcov, stats,pls,impute |
| System Requirements | |
| URL | https://stattarget.github.io |
See More
| Suggests | testthat,BiocStyle,knitr,rmarkdown |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
FollowInstallation instructions to use this package in your R session.
| Source Package | statTarget_1.40.0.tar.gz |
| Windows Binary (x86_64) | statTarget_1.40.0.zip |
| macOS Binary (x86_64) | statTarget_1.40.0.tgz |
| macOS Binary (arm64) | statTarget_1.40.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/statTarget |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/statTarget |
| Bioc Package Browser | https://code.bioconductor.org/browse/statTarget/ |
| Package Short Url | https://bioconductor.org/packages/statTarget/ |
| Package Downloads Report | Download Stats |