rSWeeP

This is thereleased version of rSWeeP; for the devel version, seerSWeeP.

Spaced Words Projection (SWeeP)

Bioconductor version: Release (3.22)

"Spaced Words Projection (SWeeP)" is a method for representing biological sequences using vectors preserving inter-sequence comparability.

Author: Camila Pereira Perico [com, cre, aut, cph] ORCID: 0000-0003-0186-4022, Danrley Rafael Fernandes [aut], Mariane Gonçalves Kulik [aut] ORCID: 0009-0000-5432-3524, Júlia Formighieri Varaschin [aut], Camilla Reginatto de Pierri [aut] ORCID: 0000-0002-6114-1734, Ricardo Assunção Vialle [aut] ORCID: 0000-0003-3311-4197, Roberto Tadeu Raittz [aut, cph] ORCID: 0000-0002-5271-991X

Maintainer: Camila P Perico <camilapp94 at gmail.com>

Citation (from within R, entercitation("rSWeeP")):

To install this package, start R (version "4.5") and enter:

if (!require("BiocManager", quietly = TRUE))    install.packages("BiocManager")BiocManager::install("rSWeeP")

For older versions of R, please refer to the appropriateBioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("rSWeeP")

biocViews	Software
Version	1.22.0
In Bioconductor since	BioC 3.11 (R-4.0) (5.5 years)
License	GPL (>= 2)
Depends	foreach,doParallel, parallel,Biostrings, methods, utils
Imports	tools,stringi
System Requirements
URL

Suggests	Rtsne,ape,Seurat,knitr,rmarkdown,tictoc,BiocStyle,testthat (>= 3.0.0)
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report	Build Report

FollowInstallation instructions to use this package in your R session.

Source Package	rSWeeP_1.22.0.tar.gz
Windows Binary (x86_64)	rSWeeP_1.22.0.zip
macOS Binary (x86_64)	rSWeeP_1.22.0.tgz
macOS Binary (arm64)	rSWeeP_1.22.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/rSWeeP
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/rSWeeP
Bioc Package Browser	https://code.bioconductor.org/browse/rSWeeP/
Package Short Url	https://bioconductor.org/packages/rSWeeP/
Package Downloads Report	Download Stats