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ncdfFlow

This is thereleased version of ncdfFlow; for the devel version, seencdfFlow.

ncdfFlow: A package that provides HDF5 based storage for flow cytometry data.

Platform availability badgeRanking badgeSupport activity badgeYears in BioConductor badgeBuild results badgeLast commit badgeDependency count badge

DOI: 10.18129/B9.bioc.ncdfFlow


Bioconductor version: Release (3.22)

Provides HDF5 storage based methods and functions for manipulation of flow cytometry data.

Author: Mike Jiang,Greg Finak,N. Gopalakrishnan

Maintainer: Mike Jiang <mike at ozette.com>

Citation (from within R, entercitation("ncdfFlow")):

Installation

To install this package, start R (version "4.5") and enter:

if (!require("BiocManager", quietly = TRUE))    install.packages("BiocManager")BiocManager::install("ncdfFlow")

For older versions of R, please refer to the appropriateBioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ncdfFlow")
Basic Functions for Flow Cytometry DataPDFR Script
Reference ManualPDF
READMEText
NEWSText
LICENSEText

Need some help? Ask on the Bioconductor Support site!

Details

biocViewsFlowCytometry,ImmunoOncology,Software
Version2.56.0
In Bioconductor sinceBioC 2.9 (R-2.14) (14 years)
LicenseAGPL-3.0-only
DependsR (>= 2.14.0),flowCore(>= 1.51.7), methods,BH
ImportsBiobase,BiocGenerics,flowCore
System Requirements
URL
See More
Suggeststestthat, parallel,flowStats,knitr
Linking Tocpp11,BH,Rhdf5lib
Enhances
Depends On Meggcyto
Imports MeflowStats,flowWorkspace,openCyto
Suggests MeCOMPASS,cydar
Links To Me
Build ReportBuild Report

Package Archives

FollowInstallation instructions to use this package in your R session.

Source PackagencdfFlow_2.56.0.tar.gz
Windows Binary (x86_64) ncdfFlow_2.56.0.zip
macOS Binary (x86_64)ncdfFlow_2.56.0.tgz
macOS Binary (arm64)ncdfFlow_2.56.0.tgz
Source Repositorygit clone https://git.bioconductor.org/packages/ncdfFlow
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/ncdfFlow
Bioc Package Browserhttps://code.bioconductor.org/browse/ncdfFlow/
Package Short Urlhttps://bioconductor.org/packages/ncdfFlow/
Package Downloads ReportDownload Stats

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