limmaGUI
This is thereleased version of limmaGUI; for the devel version, seelimmaGUI.
GUI for limma Package With Two Color Microarrays
Bioconductor version: Release (3.22)
A Graphical User Interface for differential expression analysis of two-color microarray data using the limma package.
Author: James Wettenhall [aut], Gordon Smyth [aut], Keith Satterley [ctb]
Maintainer: Gordon Smyth <smyth at wehi.edu.au>
Citation (from within R, enter
citation("limmaGUI")):Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE)) install.packages("BiocManager")BiocManager::install("limmaGUI")For older versions of R, please refer to the appropriateBioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("limmaGUI")| about.html | HTML | |
| CustMenu.html | HTML | |
| Extracting limma objects from limmaGUI files | ||
| import.html | HTML | |
| index.html | HTML | |
| InputFiles.html | HTML | |
| lgDevel.html | HTML | |
| limmaGUI Vignette | R Script | |
| LinModIntro.pdf | ||
| windowsFocus.html | HTML | |
| Reference Manual |
Details
| biocViews | BatchEffect,Bayesian,DataImport,DifferentialExpression,GUI,GeneExpression,Microarray,MultipleComparison,Normalization,Preprocessing,QualityControl,Regression,Software,TimeCourse,TwoChannel,mRNAMicroarray |
| Version | 1.86.0 |
| In Bioconductor since | BioC 1.6 (R-2.1) or earlier (> 20.5 years) |
| License | GPL (>=2) |
| Depends | |
| Imports | methods, grDevices, graphics,limma,R2HTML, tcltk,tkrplot,xtable, utils |
| System Requirements | |
| URL | http://bioinf.wehi.edu.au/limmaGUI/ |
See More
| Suggests | |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
FollowInstallation instructions to use this package in your R session.
| Source Package | limmaGUI_1.86.0.tar.gz |
| Windows Binary (x86_64) | limmaGUI_1.86.0.zip |
| macOS Binary (x86_64) | limmaGUI_1.86.0.tgz |
| macOS Binary (arm64) | limmaGUI_1.86.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/limmaGUI |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/limmaGUI |
| Bioc Package Browser | https://code.bioconductor.org/browse/limmaGUI/ |
| Package Short Url | https://bioconductor.org/packages/limmaGUI/ |
| Package Downloads Report | Download Stats |