PROPER
This is thereleased version of PROPER; for the devel version, seePROPER.
PROspective Power Evaluation for RNAseq
Bioconductor version: Release (3.22)
This package provide simulation based methods for evaluating the statistical power in differential expression analysis from RNA-seq data.
Author: Hao Wu
Maintainer: Hao Wu <hao.wu at emory.edu>
Citation (from within R, enter
citation("PROPER")):Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE)) install.packages("BiocManager")BiocManager::install("PROPER")For older versions of R, please refer to the appropriateBioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("PROPER")| Power and Sample size analysis for gene expression from RNA-seq | R Script | |
| Reference Manual |
Details
| biocViews | DifferentialExpression,ImmunoOncology,RNASeq,Sequencing,Software |
| Version | 1.42.0 |
| In Bioconductor since | BioC 3.1 (R-3.2) (10.5 years) |
| License | GPL |
| Depends | R (>= 3.3) |
| Imports | edgeR |
| System Requirements | |
| URL |
See More
| Suggests | BiocStyle,DESeq2,DSS,knitr |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | cypress |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
FollowInstallation instructions to use this package in your R session.
| Source Package | PROPER_1.42.0.tar.gz |
| Windows Binary (x86_64) | PROPER_1.42.0.zip |
| macOS Binary (x86_64) | PROPER_1.42.0.tgz |
| macOS Binary (arm64) | PROPER_1.42.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/PROPER |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/PROPER |
| Bioc Package Browser | https://code.bioconductor.org/browse/PROPER/ |
| Package Short Url | https://bioconductor.org/packages/PROPER/ |
| Package Downloads Report | Download Stats |