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GeneOverlap

This is thereleased version of GeneOverlap; for the devel version, seeGeneOverlap.

Test and visualize gene overlaps

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DOI: 10.18129/B9.bioc.GeneOverlap


Bioconductor version: Release (3.22)

Test two sets of gene lists and visualize the results.

Author: Li Shen, Icahn School of Medicine at Mount Sinai <shenli.sam at gmail.com>

Maintainer: Ant<c3><b3>nio Miguel de Jesus Domingues, Max-Planck Institute for Cell Biology and Genetics <amjdomingues at gmail.com>

Citation (from within R, entercitation("GeneOverlap")):

Installation

To install this package, start R (version "4.5") and enter:

if (!require("BiocManager", quietly = TRUE))    install.packages("BiocManager")BiocManager::install("GeneOverlap")

For older versions of R, please refer to the appropriateBioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("GeneOverlap")
Testing and visualizing gene overlaps with the "GeneOverlap" packagePDFR Script
Reference ManualPDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViewsMultipleComparison,Software,Visualization
Version1.46.0
In Bioconductor sinceBioC 2.14 (R-3.1) (11.5 years)
LicenseGPL-3
Depends
Importsstats,RColorBrewer,gplots, methods
System Requirements
URLhttp://shenlab-sinai.github.io/shenlab-sinai/
See More
SuggestsRUnit,BiocGenerics,BiocStyle
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build ReportBuild Report

Package Archives

FollowInstallation instructions to use this package in your R session.

Source PackageGeneOverlap_1.46.0.tar.gz
Windows Binary (x86_64) GeneOverlap_1.46.0.zip
macOS Binary (x86_64)GeneOverlap_1.46.0.tgz
macOS Binary (arm64)GeneOverlap_1.46.0.tgz
Source Repositorygit clone https://git.bioconductor.org/packages/GeneOverlap
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/GeneOverlap
Bioc Package Browserhttps://code.bioconductor.org/browse/GeneOverlap/
Package Short Urlhttps://bioconductor.org/packages/GeneOverlap/
Package Downloads ReportDownload Stats

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