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Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo2	Linux (Ubuntu 24.04.3 LTS)	x86_64	4.5.2 (2025-10-31) -- "[Not] Part in a Rumble"	4882
merida1	macOS 12.7.6 Monterey	x86_64	4.5.2 (2025-10-31) -- "[Not] Part in a Rumble"	4673
kjohnson1	macOS 13.7.5 Ventura	arm64	4.5.2 Patched (2025-11-04 r88984) -- "[Not] Part in a Rumble"	4607
taishan	Linux (openEuler 24.03 LTS)	aarch64	4.5.0 (2025-04-11) -- "How About a Twenty-Six"	4671
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

INSTALL results for vsclust on taishan

To the developers/maintainers of the vsclust package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/vsclust.git to reflect on this report. SeeTroubleshooting Build Report for more information.
- Use the followingRenviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. SeeRenviron.bioc for more information.
- See Martin Grigorov'sblog post for how to debug Linux ARM64 related issues on a x86_64 host.

raw results

Summary

Package: vsclust

Version: 1.12.0

Command: /home/biocbuild/R/R/bin/R CMD INSTALL vsclust

StartedAt: 2025-12-11 21:58:18 -0000 (Thu, 11 Dec 2025)

EndedAt: 2025-12-11 21:59:17 -0000 (Thu, 11 Dec 2025)

EllapsedTime: 59.0 seconds

RetCode: 0

Status: OK

Command output

################################################################################################################################################################## Running command:######   /home/biocbuild/R/R/bin/R CMD INSTALL vsclust###############################################################################################################################################################* installing to library ‘/home/biocbuild/R/R-4.5.0/site-library’* installing *source* package ‘vsclust’ ...** this is package ‘vsclust’ version ‘1.12.0’** using staged installation** libsusing C++ compiler: ‘aarch64-unknown-linux-gnu-g++ (GCC) 14.2.0’/opt/ohpc/pub/compiler/gcc/14.2.0/bin/aarch64-unknown-linux-gnu-g++ -std=gnu++17 -I"/home/biocbuild/R/R-4.5.0/include" -DNDEBUG  -I'/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include' -I/usr/local/include    -fPIC  -g -O2  -Wall -Werror=format-security  -c RcppExports.cpp -o RcppExports.o/opt/ohpc/pub/compiler/gcc/14.2.0/bin/aarch64-unknown-linux-gnu-g++ -std=gnu++17 -I"/home/biocbuild/R/R-4.5.0/include" -DNDEBUG  -I'/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include' -I/usr/local/include    -fPIC  -g -O2  -Wall -Werror=format-security  -c vsclust_algo.cpp -o vsclust_algo.ovsclust_algo.cpp: In function ‘double c_plusplus_means(const Rcpp::NumericMatrix&, Rcpp::NumericMatrix&, Rcpp::NumericVector&, Rcpp::NumericVector&, int, int, double, int, Rcpp::NumericMatrix&, double, Rcpp::IntegerVector&, double, double)’:vsclust_algo.cpp:380:7: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]  380 |       if(verbose)      |       ^~vsclust_algo.cpp:383:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’  383 |         ermin = new_fitness;      |         ^~~~~/opt/ohpc/pub/compiler/gcc/14.2.0/bin/aarch64-unknown-linux-gnu-g++ -std=gnu++17 -shared -L/home/biocbuild/R/R-4.5.0/lib -L/usr/local/lib -o vsclust.so RcppExports.o vsclust_algo.o -L/home/biocbuild/R/R-4.5.0/lib -lRinstalling to /home/biocbuild/R/R-4.5.0/site-library/00LOCK-vsclust/00new/vsclust/libs** R** data** inst** byte-compile and prepare package for lazy loading** help*** installing help indices** building package indices** installing vignettes** testing if installed package can be loaded from temporary location** checking absolute paths in shared objects and dynamic libraries** testing if installed package can be loaded from final location** testing if installed package keeps a record of temporary installation path* DONE (vsclust)