Christian Panse
| Snapshot Date: 2025-12-11 13:45 -0500 (Thu, 11 Dec 2025) |
| git_url: https://git.bioconductor.org/packages/rawDiag |
| git_branch: RELEASE_3_22 |
| git_last_commit: e72968b |
| git_last_commit_date: 2025-10-29 11:28:12 -0500 (Wed, 29 Oct 2025) |
| Back toMultiple platform build/check report for BioC 3.22: simplified long |
|
This page was generated on 2025-12-15 12:09 -0500 (Mon, 15 Dec 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" | 4882 |
| merida1 | macOS 12.7.6 Monterey | x86_64 | 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" | 4673 |
| kjohnson1 | macOS 13.7.5 Ventura | arm64 | 4.5.2 Patched (2025-11-04 r88984) -- "[Not] Part in a Rumble" | 4607 |
| taishan | Linux (openEuler 24.03 LTS) | aarch64 | 4.5.0 (2025-04-11) -- "How About a Twenty-Six" | 4671 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package1712/2361 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| rawDiag 1.6.0 (landing page) Christian Panse
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| merida1 | macOS 12.7.6 Monterey / x86_64 | OK | OK | OK | OK | | ||||||||
| kjohnson1 | macOS 13.7.5 Ventura / arm64 | OK | ERROR | skipped | skipped | |||||||||
| taishan | Linux (openEuler 24.03 LTS) / aarch64 | OK | ERROR | skipped | ||||||||||
| To the developers/maintainers of the rawDiag package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/rawDiag.git to reflect on this report. SeeTroubleshooting Build Report for more information. - Use the followingRenviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. SeeRenviron.bioc for more information. - See Martin Grigorov'sblog post for how to debug Linux ARM64 related issues on a x86_64 host. |
| Package: rawDiag |
| Version: 1.6.0 |
| Command: /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data rawDiag |
| StartedAt: 2025-12-12 05:12:52 -0000 (Fri, 12 Dec 2025) |
| EndedAt: 2025-12-12 05:13:07 -0000 (Fri, 12 Dec 2025) |
| EllapsedTime: 15.0 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
################################################################################################################################################################## Running command:###### /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data rawDiag###############################################################################################################################################################* checking for file ‘rawDiag/DESCRIPTION’ ... OK* preparing ‘rawDiag’:* checking DESCRIPTION meta-information ... OK* installing the package to build vignettes* creating vignettes ... ERROR--- re-building ‘rawDiag.Rmd’ using rmarkdownsh: line 1: /home/biocbuild/.cache/R/rawrr/rawrrassembly/linux-x64/rawrr: cannot execute binary file: Exec format errorQuitting from rawDiag.Rmd:167-172 [checkInstallRequirements]~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~<error/rlang_error>Error in `if (rvs != "No RAW file specified!") ...`:! argument is of length zero---Backtrace: ▆ 1. └─rawDiag::checkRawrr() 2. ├─base::isFALSE(rawrr:::.isAssemblyWorking()) 3. └─rawrr:::.isAssemblyWorking()~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Error: processing vignette 'rawDiag.Rmd' failed with diagnostics:argument is of length zero--- failed re-building ‘rawDiag.Rmd’SUMMARY: processing the following file failed: ‘rawDiag.Rmd’Error: Vignette re-building failed.Execution halted