Movatterモバイル変換


[0]ホーム

URL:


Back toMultiple platform build/check report for BioC 3.22:   simplified   long
ABCDEFGHIJKL[M]NOPQRSTUVWXYZ

This page was generated on 2025-12-15 12:09 -0500 (Mon, 15 Dec 2025).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 24.04.3 LTS)x86_644.5.2 (2025-10-31) -- "[Not] Part in a Rumble"4882
merida1macOS 12.7.6 Montereyx86_644.5.2 (2025-10-31) -- "[Not] Part in a Rumble"4673
kjohnson1macOS 13.7.5 Venturaarm644.5.2 Patched (2025-11-04 r88984) -- "[Not] Part in a Rumble"4607
taishanLinux (openEuler 24.03 LTS)aarch644.5.0 (2025-04-11) -- "How About a Twenty-Six"4671
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package1417/2361HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
MultiMed 2.32.0  (landing page)
Simina M. Boca
Snapshot Date: 2025-12-11 13:45 -0500 (Thu, 11 Dec 2025)
git_url: https://git.bioconductor.org/packages/MultiMed
git_branch: RELEASE_3_22
git_last_commit: 5b10c46
git_last_commit_date: 2025-10-29 10:20:26 -0500 (Wed, 29 Oct 2025)
nebbiolo2Linux (Ubuntu 24.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.7.6 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.7.5 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published
taishanLinux (openEuler 24.03 LTS) / aarch64  OK    OK    OK  


CHECK results for MultiMed on taishan

To the developers/maintainers of the MultiMed package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/MultiMed.git to reflect on this report. SeeTroubleshooting Build Report for more information.
- Use the followingRenviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. SeeRenviron.bioc for more information.
- See Martin Grigorov'sblog post for how to debug Linux ARM64 related issues on a x86_64 host.

raw results


Summary

Package: MultiMed
Version: 2.32.0
Command: /home/biocbuild/R/R/bin/R CMD check --install=check:MultiMed.install-out.txt --library=/home/biocbuild/R/R/site-library --no-vignettes --timings MultiMed_2.32.0.tar.gz
StartedAt: 2025-12-12 12:53:28 -0000 (Fri, 12 Dec 2025)
EndedAt: 2025-12-12 12:54:03 -0000 (Fri, 12 Dec 2025)
EllapsedTime: 35.1 seconds
RetCode: 0
Status:  OK  
CheckDir: MultiMed.Rcheck
Warnings: 0

Command output

################################################################################################################################################################## Running command:######   /home/biocbuild/R/R/bin/R CMD check --install=check:MultiMed.install-out.txt --library=/home/biocbuild/R/R/site-library --no-vignettes --timings MultiMed_2.32.0.tar.gz###############################################################################################################################################################* using log directory ‘/home/biocbuild/bbs-3.22-bioc/meat/MultiMed.Rcheck’* using R version 4.5.0 (2025-04-11)* using platform: aarch64-unknown-linux-gnu* R was compiled by    aarch64-unknown-linux-gnu-gcc (GCC) 14.2.0    GNU Fortran (GCC) 14.2.0* running under: openEuler 24.03 (LTS)* using session charset: UTF-8* using option ‘--no-vignettes’* checking for file ‘MultiMed/DESCRIPTION’ ... OK* this is package ‘MultiMed’ version ‘2.32.0’* checking package namespace information ... OK* checking package dependencies ... OK* checking if this is a source package ... OK* checking if there is a namespace ... OK* checking for hidden files and directories ... OK* checking for portable file names ... OK* checking for sufficient/correct file permissions ... OK* checking whether package ‘MultiMed’ can be installed ... OK* checking installed package size ... OK* checking package directory ... OK* checking ‘build’ directory ... OK* checking DESCRIPTION meta-information ... NOTEMalformed Description field: should contain one or more complete sentences.License components with restrictions not permitted:  GPL (>= 2) + file LICENSE* checking top-level files ... OK* checking for left-over files ... OK* checking index information ... OK* checking package subdirectories ... OK* checking code files for non-ASCII characters ... OK* checking R files for syntax errors ... OK* checking whether the package can be loaded ... OK* checking whether the package can be loaded with stated dependencies ... OK* checking whether the package can be unloaded cleanly ... OK* checking whether the namespace can be loaded with stated dependencies ... OK* checking whether the namespace can be unloaded cleanly ... OK* checking loading without being on the library search path ... OK* checking dependencies in R code ... OK* checking S3 generic/method consistency ... OK* checking replacement functions ... OK* checking foreign function calls ... OK* checking R code for possible problems ... NOTEmedTest: no visible global function definition for ‘lm.fit’medTest: no visible global function definition for ‘lm.wfit’Undefined global functions or variables:  lm.fit lm.wfitConsider adding  importFrom("stats", "lm.fit", "lm.wfit")to your NAMESPACE file.* checking Rd files ... OK* checking Rd metadata ... OK* checking Rd cross-references ... OK* checking for missing documentation entries ... OK* checking for code/documentation mismatches ... OK* checking Rd \usage sections ... OK* checking Rd contents ... OK* checking for unstated dependencies in examples ... OK* checking contents of ‘data’ directory ... OK* checking data for non-ASCII characters ... OK* checking data for ASCII and uncompressed saves ... OK* checking files in ‘vignettes’ ... OK* checking examples ... OK* checking for unstated dependencies in ‘tests’ ... OK* checking tests ...  Running ‘runTests.R’ OK* checking for unstated dependencies in vignettes ... OK* checking package vignettes ... OK* checking running R code from vignettes ... SKIPPED* checking re-building of vignette outputs ... SKIPPED* checking PDF version of manual ... OK* DONEStatus: 2 NOTEsSee  ‘/home/biocbuild/bbs-3.22-bioc/meat/MultiMed.Rcheck/00check.log’for details.

Installation output

MultiMed.Rcheck/00install.out

################################################################################################################################################################## Running command:######   /home/biocbuild/R/R/bin/R CMD INSTALL MultiMed###############################################################################################################################################################* installing to library ‘/home/biocbuild/R/R-4.5.0/site-library’* installing *source* package ‘MultiMed’ ...** this is package ‘MultiMed’ version ‘2.32.0’** using staged installation** R** data** inst** byte-compile and prepare package for lazy loading** help*** installing help indices** building package indices** installing vignettes** testing if installed package can be loaded from temporary location** testing if installed package can be loaded from final location** testing if installed package keeps a record of temporary installation path* DONE (MultiMed)

Tests output

MultiMed.Rcheck/tests/runTests.Rout

R version 4.5.0 (2025-04-11) -- "How About a Twenty-Six"Copyright (C) 2025 The R Foundation for Statistical ComputingPlatform: aarch64-unknown-linux-gnuR is free software and comes with ABSOLUTELY NO WARRANTY.You are welcome to redistribute it under certain conditions.Type 'license()' or 'licence()' for distribution details.R is a collaborative project with many contributors.Type 'contributors()' for more information and'citation()' on how to cite R or R packages in publications.Type 'demo()' for some demos, 'help()' for on-line help, or'help.start()' for an HTML browser interface to help.Type 'q()' to quit R.> BiocGenerics:::testPackage("MultiMed")RUNIT TEST PROTOCOL -- Fri Dec 12 12:53:57 2025 *********************************************** Number of test functions: 3 Number of errors: 0 Number of failures: 0  1 Test Suite : MultiMed RUnit Tests - 3 test functions, 0 errors, 0 failuresNumber of test functions: 3 Number of errors: 0 Number of failures: 0 > > proc.time()   user  system elapsed   0.439   0.045   0.635

Example timings

MultiMed.Rcheck/MultiMed-Ex.timings

nameusersystemelapsed
medTest0.0690.0120.161
medTest.SBMH0.7160.0000.909

[8]ページ先頭

©2009-2025 Movatter.jp