DOI:10.3852/09-016 - Corpus ID: 6689439
Fungi evolved right on track
@article{Lcking2009FungiER, title={Fungi evolved right on track}, author={Robert L{\"u}cking and Sabine M. Huhndorf and Donald H. Pfister and Eimy Rivas Plata and H. Thorsten Lumbsch}, journal={Mycologia}, year={2009}, volume={101}, pages={810 - 822}, url={https://api.semanticscholar.org/CorpusID:6689439}}- R. LückingS. HuhndorfH. Lumbsch
- Published inMycologia1 November 2009
- Biology, Environmental Science
The origin of fungi was re-estimated at between 760 million and 1.06 billion y ago and the origin of the Ascomycota at 500–650 million y ago, much more consistent than previous estimates and much better in line with the fossil record of fungi and plants and the ecological interdependence between filamentous fungi and land plants.
225 Citations
225 Citations
Dating the molecular clock in fungi – how close are we?
- M. BerbeeJohn W. Taylor
- 2010
Biology, Environmental Science
Dating the Diversification of the Major Lineages of Ascomycota (Fungi)
Molecular dating is performed to estimate the divergence times of most of the major groups of Ascomycota, including estimates for classes, orders and families of both lichenized and non–lichenized Ascomygota, many of which had not been previously dated.
Dating divergence of Polystigma and other Sordariomycetes
- A. HabibiZ. Banihashemi
- 2018
Biology, Environmental Science
Dating analyses showed that Polystigma diverged from Xylariales approximately 90 Million years ago in the late Cretaceous in which most other diversification events occurred, and suggested thatPolystigma amygdalinum and P. rubrum diverged in early Eocene concurrently with the divergence of their hosts, also providing a base for speculation on the location of evolution of these pathogens.
Paleogene Radiation of a Plant Pathogenic Mushroom
- M. CoetzeeP. BloomerM. WingfieldB. Wingfield
- 2011
Biology, Environmental Science
The distribution of extant Armillaria species is the result of ancient long- distance dispersal rather than vicariance due to continental drift, highlighting the important role of long-distance dispersal in the radiation of fungal pathogens from the Southern Hemisphere.
Genome-scale data reveal the role of hybridization in lichen-forming fungi
- R. KeulerAlexis GarretsonS. Leavitt
- 2020
Environmental Science, Biology
Data suggest that the rock-dwelling western North American subalpine endemic R. shushanii is potentially the result of a hybrid speciation event, and introgression may have also played a role in other taxa, including vagrant species R. haydenii, R. idahoensis and R. arbuscula.
A genomic perspective on fungal diversity and evolution.
- S. MondoIgor V. Grigoriev
- 2025
Biology, Environmental Science
Using published genomes available through GenBank and the Joint Genome Institute's MycoCosm platform, kingdom-wide phylogenies were generated and used to highlight how fungal genomes have changed over time, and major evolutionary transitions that occurred across the fungal kingdom are discussed.
Genomic and fossil windows into the secret lives of the most ancient fungi
- M. BerbeeC. Strullu‐DerrienJohn W. Taylor
- 2020
Biology, Environmental Science
In this Review, Berbee and colleagues examine the fossil and genomic record of ancient fungi and the inferences the authors can make about their lifestyle and contrast this emerging picture against evidence from the fossil record to develop a new, integrated perspective on the origin and early evolution of fungi.
Estimating the Phanerozoic history of the Ascomycota lineages: combining fossil and molecular data.
- C. BeimfordeK. FeldbergA. Schmidt
- 2014
Biology, Environmental Science
Evidence of ancient horizontal gene transfer between fungi and the terrestrial alga Trebouxia
- A. BeckP. DivakarN. ZhangM. MolinaL. Struwe
- 2014
Biology, Environmental Science
Evidence is found for three putative HGT events of fungal genes into the Trebouxia genome, but these are likely more ancient (over 600 mya) than the origin of lichenization within the fungal Ascomycetes.
Overview of Phylogenetic Approaches to Mycorrhizal Biogeography, Diversity and Evolution
- S. Sánchez-RamírezAndrew W. WilsonMartin Ryberg
- 2017
Biology, Environmental Science
This review focuses on describing phylogenetic approaches that have been or could be applied in mycorrhizal biogeographic studies, and summarizing molecular-based studies and methods for species delimitation, pointing out the need for robust phylogenetic hypotheses in a phylogenomic or multi-locus framework.
...
63 References
Dating divergences in the Fungal Tree of Life: review and new analyses.
- John W. TaylorM. Berbee
- 2006
Biology
The history of dating fungal divergences by nucleic acid variation is reviewed and a dataset of 50 genes for 25 selected fungi, plants and animals is used to investigate divergence times in kingdom Fungi and the choice of fossil calibration points on dating divergence in fungi is tested.
Divergence time estimates for the early history of animal phyla and the origin of plants, animals and fungi
- D. YC. WangSudhir KumarS. Blair Hedges
- 1999
Biology, Environmental Science
Proceedings of the Royal Society of London…
By inference, the basal animal phyla (Porifera, Cnidaria, Ctenophora) diverged between about 1200 – 1500 Ma, which suggests that at least sixAnimal phyla originated deep in the Precambrian, more than 400 million years earlier than their first appearance in the fossil record.
Dating the evolutionary radiations of the true fungi
- M. BerbeeJohn W. Taylor
- 1993
Biology, Environmental Science
A relative time scale for the origin and radiation of major lineages of the true fungi is constructed, using the 18S ribosomal RNA gene sequence data of 37 fungal species, and then calibrate the time scale using fossil evidence.
Fungi Evolution Revisited: Application of the Penalized Likelihood Method to a Bayesian Fungal Phylogeny Provides a New Perspective on Phylogenetic Relationships and Divergence Dates of Ascomycota Groups
- A. C. PadovanG. SansonA. BrunsteinM. Briones
- 2004
Biology
A dataset of 166 small subunit (18S) rDNA sequences, representative of all groups of Fungi and used as input in a Bayesian phylogenetic analysis, suggests that Discomycetes are a basal group of filamentous AscomyCetes and probably maintain ancestor characters since their representatives are intermingled among other filamentous fungi.
Date of the monocot-dicot divergence estimated from chloroplast DNA sequence data.
The results imply that the angiosperm lineage emerged in Jurassic-Triassic time, which considerably predates its appearance in the fossil record (approximately 120 Myr ago), which can be taken as an upper bound for the age of angiosperms.
Determining Divergence Times of the Major Kingdoms of Living Organisms with a Protein Clock
- R. DoolittleD. FengS. TsangG. ChoE. Little
- 1996
Biology
P phylogenetic analysis of the same sequences indicates that fungi and animals shared a common ancestor more recently than either did with plants, the greater difference resulting from the fungal lineage changing faster than the animal and plant lines over the last 965 million years.
A molecular timeline for the origin of photosynthetic eukaryotes.
- H. YoonJ. HackettC. CinigliaG. PintoD. Bhattacharya
- 2004
Biology, Environmental Science
An ancient (late Paleoproterozoic) origin of photosynthetic eukaryotes with the primary endosymbiosis that gave rise to the first alga having occurred after the split of the Plantae from the opisthokonts sometime before 1,558 MYA is supported.
Reconstructing the early evolution of Fungi using a six-gene phylogeny
- Timothy Y. JamesF. KauffR. Vilgalys
- 2006
Biology, Environmental Science
It is indicated that there may have been at least four independent losses of the flagellum in the kingdom Fungi, and the enigmatic microsporidia seem to be derived from an endoparasitic chytrid ancestor similar to Rozella allomycis, on the earliest diverging branch of the fungal phylogenetic tree.
The timing of eukaryotic evolution: does a relaxed molecular clock reconcile proteins and fossils?
It is shown that, according to 95% credibility intervals, the eukaryotic kingdoms diversified 950-1,259 million years ago (Mya), animals diverged from choanoflagellates 761-957 Mya, and the debated age of the split between protostomes and deuterostomes occurred 642-761 Mya.
ANGIOSPERM DIVERGENCE TIMES: THE EFFECT OF GENES, CODON POSITIONS, AND TIME CONSTRAINTS
- S. MagallónM. Sanderson
- 2005
Biology, Environmental Science
Evolution; international journal of organic…
Although absolute age estimates of angiosperms and angiosperm clades are older than their earliest fossils, the estimated pace of phylogenetic diversification largely agrees with the rapid appearance ofAngiosperm lineages in stratigraphic sequences.
...
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