DOI:10.1038/nature07992 - Corpus ID: 4323298
Precise genome modification in the crop species Zea mays using zinc-finger nucleases
@article{Shukla2009PreciseGM, title={Precise genome modification in the crop species Zea mays using zinc-finger nucleases}, author={Vipula K. Shukla and Yannick Doyon and Jeffrey C. Miller and Russell Dekelver and Erica A. Moehle and Sarah E. Worden and Jon C. Mitchell and Nicole L. Arnold and Sunita M. Gopalan and Xiangdong Meng and Vivian M. Choi and Jeremy M. Rock and Ying-Ying Wu and George E. Katibah and Zhifang Gao and David G Mccaskill and Matthew A. Simpson and Beth Blakeslee and Scott A. Greenwalt and Holly Butler and Sarah Hinkley and Lei Zhang and Edward J. Rebar and Philip D. Gregory and Fyodor D. Urnov}, journal={Nature}, year={2009}, volume={459}, pages={437-441}, url={https://api.semanticscholar.org/CorpusID:4323298}}- V. ShuklaY. DoyonF. Urnov
- Published inNature21 May 2009
- Agricultural and Food Sciences, Biology, Engineering
ZFNs can be used in any plant species amenable to DNA delivery and are established as a new strategy for plant genetic manipulation in basic science and agricultural applications.
907 Citations
907 Citations
Targeted mutagenesis using zinc-finger nucleases in perennial fruit trees
- R. PeerGil RivlinM. Flaishman
- 2014
Biology, Environmental Science
It is concluded that targeting a gene in apple or fig with a ZFN introduced by transient or stable transformation should allow knockout of a gene of interest.
Genetic Engineering of Plants Using Zn Fingers, TALENs, and CRISPRs
- A. BilichakF. Eudes
- 2016
Engineering, Biology
Genome modifications in crops employing engineered nucleases: A review
- H. ZalaTejas C. BosamiaY. ShuklaSushil KumarK. Kulkarni
- 2016
Agricultural and Food Sciences, Biology
Modifications using genome editing are similar to natural or conventional method like induced mutations and are foreseen to waive regulatory actions as applicable to genetically modified organisms.
Use of Sequence Specific Nucleases for Site Specific Modification of Plant Genome for Crop Improvement
- K. BhutiaWricha Tyagi Karma L. BhutiaWricha Tyagi
- 2017
Agricultural and Food Sciences, Biology
This review article highlights the application of molecular techniques like ZFNs, TALENs and CRISPR/ Cas in site-specific modification of different plant genomes, which has made gene expression, and regulation studies faster, easier and more reliable.
Low frequency of zinc-finger nuclease-induced mutagenesis in Populus
- Haiwei LuAmy L. KlockoM. DowCathleen MaVindhya AmarasingheS. Strauss
- 2016
Biology, Environmental Science
The combined effects of low recovery of transgenic plants, a modest mutation frequency, and much higher reported rates of directed mutation for other gene editing methods suggest that the efficient use of ZFNs in poplar requires further technical improvements.
Nontransgenic Genome Modification in Plant Cells1[W][OA]
- I. MartonA. ZukerA. Vainstein
- 2010
Biology
This work presents an alternative, nontransgenic approach for ZFN delivery and production of mutant plants using a novel Tobacco rattle virus (TRV)-based expression system for indirect transient delivery of ZFNs into a variety of tissues and cells of intact plants.
A novel arrangement of zinc finger nuclease system for in vivo targeted genome engineering: the tomato LEC1-LIKE4 gene case
- Z. HiliotiIoannis GanopoulosS. AjithI. BossisA. Tsaftaris
- 2016
Biology, Engineering
It is revealed that sequence changes upstream of the DNA binding domain of L1L4 can lead to phenotypic diversity including fruit organ, underscore the utility of engineered ZFN approach in targeted mutagenesis of tomato plant which may accelerate translational research and tomato breeding.
Targeted Mutagenesis of Duplicated Genes in Soybean with Zinc-Finger Nucleases1[W][OA]
- Shaun J. CurtinFeng ZhangR. Stupar
- 2011
Biology, Environmental Science
Target mutagenesis of a transgene and nine endogenous soybean genes using zinc-finger nucleases provides an efficient method for making mutations in duplicate genes that are otherwise difficult to study due to redundancy.
Genome modifications in crops employing engineered nucleases
- H. ZalaTejas C. BosamiaY. ShuklaSushil KumarK. Kulkarni
- 2016
Agricultural and Food Sciences, Engineering
Modifications using genome editing are similar to natural or conventional method like induced mutations and are foreseen to waive regulatory actions as applicable to genetically modified organisms.
Genome editing in wheat microspores and haploid embryos mediated by delivery of ZFN proteins and cell‐penetrating peptide complexes
- A. BilichakLakshmi Sastry-DentF. Eudes
- 2019
Biology, Engineering
This is the first description of plant microspore genome editing by a ZFN when delivered as a protein complexed with CPP, which eliminates the need for stable nuclease genomic integration and allows generation of edited, but not transgenic cells or tissues.
...
49 References
Targeted mutagenesis using zinc-finger nucleases in Arabidopsis.
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Biology, Environmental Science
Data indicate that ZFNs can form the basis of a highly efficient method for targeted mutagenesis of plant genes and demonstrate efficient transmission of the ZFN-induced mutations.
Targeted transgene integration in plant cells using designed zinc finger nucleases
- Charles Q. CaiY. DoyonJ. Petolino
- 2008
Biology, Environmental Science
It is reported that designed zinc finger nucleases (ZFNs) can drive site-directed DNA integration into transgenic and native gene loci and point toward a novel approach for targeted gene addition, replacement and trait stacking in plants.
Rapid "open-source" engineering of customized zinc-finger nucleases for highly efficient gene modification.
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- 2008
Biology, Engineering
Modification of Endogenous Natural Genes by Gene Targeting in Rice and Other Higher Plants
The current status of targeting of an endogenous natural gene in rice and other higher plants is addressed and possible models for Agrobacterium- mediated gene targeting by homologous recombination using a strong positive–negative selection are discussed.
An improved zinc-finger nuclease architecture for highly specific genome editing
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Biology, Engineering
Using structure-based design, two variant ZFNs are engineer that modify a native endogenous locus as efficiently as the parental architecture, but with a >40-fold reduction in homodimer function and much lower levels of genome-wide cleavage.
Heritable Targeted Gene Disruption in Zebrafish Using Designed Zinc Finger Nucleases
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Biology
The frequency and precision of gene-disruption events observed suggest that this approach should be applicable to any loci in zebrafish or in other organisms that allow mRNA delivery into the fertilized egg.
Targeted gene addition into a specified location in the human genome using designed zinc finger nucleases
- E. A. MoehleJeremy M. RockM. Holmes
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Biology
Data reveal the surprising versatility of the specialized polymerase machinery involved in double-strand break repair, illuminate a powerful approach to mammalian cell engineering, and open the possibility of ZFN-driven gene addition therapy for human genetic disease.
Highly efficient endogenous human gene correction using designed zinc-finger nucleases
- F. UrnovJeffrey C. MillerM. Holmes
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Medicine
It is shown that zinc-finger nucleases designed against an X-linked severe combined immune deficiency mutation in the IL2Rγ gene yielded more than 18% gene-modified human cells without selection, raising the possibility of strategies based on zinc- finger nucleases for the treatment of disease.
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Biology, Environmental Science
After the elucidation of the sequence of the yeast genome a major effort was started to elucidate the biological function of all open reading frames of this organisms by targeted gene replacement via homologous recombination, which might finally result on the set up of a general applicable technique in flowering plants.
Physical and Genetic Structure of the Maize Genome Reflects Its Complex Evolutionary History
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Biology, Agricultural and Food Sciences
Reconstructing the paleoethnobotany of the maize genome indicates that the progenitors of modern maize contained ten chromosomes, and a sequence-ready fingerprinted contig-based physical map is constructed to better understand maize genome organization and to build a framework for genome sequencing.
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