phylogeny
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Bioconvert is a collaborative project to facilitate the interconversion of life science data from one format to another.
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Jun 19, 2025 - Python
Haplotype-aware CNV analysis from single-cell RNA-seq
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Jun 25, 2025 - R
📚 a complete reference book for treeio, tidytree and ggtree packages
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Jul 13, 2022 - TeX
The Visualization Multitool for Molecular Epidemiology and Bioinformatics
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Jul 11, 2025 - TypeScript
A fast and scalable phylogenetic tree viewer for microbiome data analysis
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Aug 4, 2024 - JavaScript
MTBseq is an automated pipeline for mapping, variant calling and detection of resistance mediating and phylogenetic variants from illumina whole genome sequence data of Mycobacterium tuberculosis complex isolates.
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Aug 9, 2024 - Perl
Tools for accessing the Botanical Information and Ecology Network (BIEN) database
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Jun 5, 2025 - C++
Phylogenetic compression of extremely large genome collections [661k ↘𝟭𝟲𝗚𝗶𝗕 | BIGSIdata ↘𝟰𝟴𝗚𝗶𝗕 | AllTheBact'23 ↘𝟳𝟱𝗚𝗶𝗕]
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Apr 1, 2025 - Python
Framework for Metastatic And Clonal History INtegrative Analysis
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Mar 5, 2021 - Jupyter Notebook
Alignment against all pre-2019 bacteria on laptops within a few hours (former MOF-Search)
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Apr 17, 2024 - Python
Accurate, resource-frugal and deterministic DNA sequence classifier.
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Jul 9, 2025 - Python
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