linkml
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LLM-based ontological extraction tools, including SPIRES
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Apr 16, 2025 - Jupyter Notebook
Linked Open Data Modeling Language
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Apr 24, 2025 - Python
Schema and generated objects for biolink data model and upper ontology
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Apr 7, 2025 - Python
Simple Standard for Sharing Ontology Mappings
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Apr 11, 2025 - Python
A standardized browser-based spreadsheet editor and validator that can be run offline and locally, and which includes templates for SARS-CoV-2 and Monkeypox sampling data. This project, created by the Centre for Infectious Disease Genomics and One Health (CIDGOH), at Simon Fraser University, is now an open-source collaboration with contributions…
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Apr 23, 2025 - JavaScript
Python toolkit for SSSOM mapping format
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Apr 21, 2025 - Python
Data transformation framework for LinkML data models
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Feb 28, 2025 - Python
Link Modeling Language (LinkML) model
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Apr 17, 2025 - Python
Automated assistance for the schema development lifecycle
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Mar 13, 2025 - Python
Structure your data in a FAIR way using google sheets or TSVs. These are then converted to LinkML, and from there other formats
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Sep 5, 2024 - Python
SQL and SQLite builds of OWL ontologies
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Feb 25, 2025 - Python
Runtime support for linkml generated models
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Apr 10, 2025 - Python
National Microbiome Data Collaborative (NMDC) unified data model
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Apr 23, 2025 - Python
A knowledge extraction tool that uses a large language model to extract semantic information from text
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Jan 3, 2023 - Python
wrapper for multiple linkml storage engines
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Apr 17, 2025 - Python
Tools for working with KGCL
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Nov 19, 2024 - Python
Data ingest application for Monarch Initiative knowledge graph using Koza
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Apr 17, 2025 - Python
CRDC-H model in LinkML, developed by the Center for Cancer Data Harmonization (CCDH)
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Jan 7, 2022 - Python
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