• 👋 Hi, I'm Ajinkya, a software developer with a passion for building new imaging algorithms and building exciting projects.
• I have a particular interest in scientific bio-image analysis, data analysis using Python, and developing scientific end-end GUI applications usingStreamlit.

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1. PyTextureAnalysisPyTextureAnalysisPublic

   PyTextureAnalysis is a Python package for analyzing the texture of images. It includes functions for calculating local orientation, degree of coherence, and structure tensor of an image. This packa…

   Python 30 7

2. PyOrganoIDNetPyOrganoIDNetPublic

   This repository provides StarDist and CellPose models, meticulously trained on a large dataset of Pancreatic Ductal Adenocarcinoma organoids co-cultured with immune cells. Pre-print available at ht…

   Jupyter Notebook 2

3. PyHistologyPyHistologyPublic

   Python package that uses colorspace-based segmentation to analyze histopathology images.

   Python 13 3

4. PySpatialHistologyAnalysisPySpatialHistologyAnalysisPublic

   Package using StarDist and Python that performs object detection and spatial analysis on H&E images

   Python 4

5. PyElispotAnalysisPyElispotAnalysisPublic

   Detecting spots (IFN-Gamma positive cells) from an Elispot assay image using Deep learning

   Python 2

6. PyBlendPatchesPyBlendPatchesPublic

   Efficiently handles large images by segmenting them into patches, performing instance/semantic segmentation, and then reconstructing the patches into a complete, segmented mask.

   Jupyter Notebook 3