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hmclearn: Fit Statistical Models Using Hamiltonian Monte Carlo

Provide users with a framework to learn the intricacies of the Hamiltonian Monte Carlo algorithm with hands-on experience by tuning and fitting their own models. All of the code is written in R. Theoretical references are listed below:. Neal, Radford (2011) "Handbook of Markov Chain Monte Carlo" ISBN: 978-1420079418, Betancourt, Michael (2017) "A Conceptual Introduction to Hamiltonian Monte Carlo" <doi:10.48550/arXiv.1701.02434>, Thomas, S., Tu, W. (2020) "Learning Hamiltonian Monte Carlo in R" <doi:10.48550/arXiv.2006.16194>, Gelman, A., Carlin, J. B., Stern, H. S., Dunson, D. B., Vehtari, A., & Rubin, D. B. (2013) "Bayesian Data Analysis" ISBN: 978-1439840955, Agresti, Alan (2015) "Foundations of Linear and Generalized Linear Models ISBN: 978-1118730034, Pinheiro, J., Bates, D. (2006) "Mixed-effects Models in S and S-Plus" ISBN: 978-1441903174.

Version:0.0.5
Depends:R (≥ 3.6)
Imports:bayesplot, parallel,MASS,mvtnorm
Suggests:knitr,rmarkdown,Matrix,lme4,carData,mlbench,ggplot2,mlmRev,testthat,MCMCpack
Published:2020-10-05
DOI:10.32614/CRAN.package.hmclearn
Author:Samuel Thomas [cre, aut], Wanzhu Tu [ctb]
Maintainer:Samuel Thomas <samthoma at iu.edu>
License:GPL-3
NeedsCompilation:no
Language:en-US
Materials:README,NEWS
CRAN checks:hmclearn results

Documentation:

Reference manual:hmclearn.html ,hmclearn.pdf
Vignettes:linear_mixed_effects_hmclearn (source)
linear_regression_hmclearn (source)
logistic_mixed_effects_hmclearn (source)
logistic_regression_hmclearn (source)
poisson_regression_hmclearn (source)

Downloads:

Package source: hmclearn_0.0.5.tar.gz
Windows binaries: r-devel:hmclearn_0.0.5.zip, r-release:hmclearn_0.0.5.zip, r-oldrel:hmclearn_0.0.5.zip
macOS binaries: r-release (arm64):hmclearn_0.0.5.tgz, r-oldrel (arm64):hmclearn_0.0.5.tgz, r-release (x86_64):hmclearn_0.0.5.tgz, r-oldrel (x86_64):hmclearn_0.0.5.tgz
Old sources: hmclearn archive

Linking:

Please use the canonical formhttps://CRAN.R-project.org/package=hmclearnto link to this page.


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